*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, SxM, Stein2006
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hv-SxM-Stein-5H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, SxM, Stein2006 [ View Map Set Info ]
Map Name: Hv-SxM-Stein-5H
Map Start: 0
Map Stop: 153.79
Features by Type:
64 locus
64 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 64.       Previous | of 3 | Next
Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-5H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
GBS0087-5H locus 20.74 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBS0087-5H locus 26.5 () Automated name-based View Maps
GBR0618-5H locus 21.52 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR0618-5H locus 27.3 () Automated name-based View Maps
GBR0612-5H locus 22.44 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR0612-5H locus 28.2 () Automated name-based View Maps
GBS0629-5H locus 22.51 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBS0629-5H locus 28.3 () Automated name-based View Maps
GBR0238-5H locus 22.52 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR0238-5H locus 28.3 () Automated name-based View Maps
GBR1697-5H locus 30.61 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR1697-5H locus 36.4 () Automated name-based View Maps
GBR1644-5H locus 30.67 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR1644-5H locus 36.5 () Automated name-based View Maps
GBR0945-5H locus 34.4 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR0945-5H locus 40.5 () Automated name-based View Maps
GBS0561-5H locus 44.75 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBS0561-5H locus 52.1 () Automated name-based View Maps
GBS0462-5H locus 45.7 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBS0462-5H locus 53.1 () Automated name-based View Maps
GBR0482-5H locus 47.55 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR0482-5H locus 55.1 () Automated name-based View Maps
GBS0892-5H locus 57.42 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBS0892-5H locus 67 () Automated name-based View Maps
GBS0613-5H locus 61.14 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBS0613-5H locus 71.5 () Automated name-based View Maps
GBM1426-5H locus 64.8 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBM1426-5H locus 75.9 () Automated name-based View Maps
GBR0528-5H locus 66.09 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR0528-5H locus 79.3 () Automated name-based View Maps
Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-5H GBR0528-5H locus 94.01 () Automated name-based View Maps
GBR1543-5H locus 69.23 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR1543-5H locus 80.7 () Automated name-based View Maps
GBR0199-5H locus 75.62 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR0199-5H locus 87.7 () Automated name-based View Maps
GBM1041-5H locus 75.8 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBM1041-5H locus 87.8 () Automated name-based View Maps
GBR1041-5H locus 76.46 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR1041-5H locus 88.4 () Automated name-based View Maps
GBR1612-5H locus 76.49 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR1612-5H locus 88.4 () Automated name-based View Maps
GBR0714-5H locus 82.74 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR0714-5H locus 99.5 () Automated name-based View Maps
GBR1079-5H locus 82.99 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR1079-5H locus 94.2 () Automated name-based View Maps
GBR1857-5H locus 83.57 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR1857-5H locus 94 () Automated name-based View Maps
GBM1363-5H locus 106.65 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBM1363-5H locus 138.9 () Automated name-based View Maps
GBS0138-5H locus 107.18 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBS0138-5H locus 139.7 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.