*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, SxM, Stein2006
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hv-SxM-Stein-7H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, SxM, Stein2006 [ View Map Set Info ]
Map Name: Hv-SxM-Stein-7H
Map Start: 0
Map Stop: 133.45
Features by Type:
66 locus
66 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 66.       of 3 | Next
Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-7H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
ABC255-7H locus 52.77 Barley - Barley, GxHN, SFNB - Hordeum-GxHN-SFNB-7H ABC255 locus 4.3 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H ABC255 locus 80.65 () Automated name-based View Maps
Barley - Barley, GxH - Hordeum-GxH-7H ABC255 locus 2.04 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-7H ABC255 locus -17.4 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-7H ABC255 locus 0 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-7H ABC255 locus 56.6 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-7H ABC255 locus 64.3 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-7H ABC255 locus 60.99 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H ABC255 locus 60.99 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-7H ABC255 locus 60.88 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-7H ABC255 locus 67.6 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-7H ABC255 locus 14.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-7H ABC255 locus 68.7 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H ABC255 locus 68.78 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H ABC255 locus 64.1 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-7H ABC255 locus 54.53 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H ABC255 locus 68.78 () Automated name-based View Maps
Barley - Barley, Pilot OPA1, Consensus - Hordeum-PilotOPA1-7H ABC255 locus 57.41 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-7H ABC255 locus 60.9 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 ABC255 locus 68.78 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-7H ABC255 locus 58.3 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-7H ABC255 locus 60.9 () Automated name-based View Maps
Barley - Barley, AxK - Hordeum-AxK-7H ABC255 locus 65 () Automated name-based View Maps
ABC305-7H locus 101.38 No other positions
ABC310b-7H locus 94.34 Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-7H ABC310b-7H locus 123.49 () Automated name-based View Maps
ABG075-7H locus 4.51 No other positions
ABG312-7H locus 0.56 Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-7H ABG312-7H locus 0 () Automated name-based View Maps
ABG320-7H locus 11.13 Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H ABG320 locus 26.17 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-7H ABG320 locus 11.6 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-7H ABG320 locus 13.4 () Automated name-based View Maps
Barley - Barley, Pilot OPA1, Consensus - Hordeum-PilotOPA1-7H ABG320 locus 10.1 () Automated name-based View Maps
Barley - Barley, AxK - Hordeum-AxK-7H ABG320 locus 7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-7H ABG320 locus 16.4 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-7H ABG320 locus 19.8 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 ABG320 locus 26.17 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-7H ABG320 locus 14.7 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-7H ABG320 locus 10.8 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H ABG320 locus 18.7 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-7H ABG320 locus -59 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSAP - Hordeum-SxM-SSAP-7H ABG320 locus 10.9 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H ABG320 locus 26.17 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H ABG320 locus 16.23 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H ABG320 locus 16.52 () Automated name-based View Maps
Barley - Barley, SxM basemap - Hordeum-SxM-base-7H ABG320 locus 14.9 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-7H ABG320 locus 16.52 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-7H ABG320 locus 14.7 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-7H ABG320 locus 11.5 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-7H ABG320 locus 20.85 () Automated name-based View Maps
ABG380-7H locus 30.58 Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-7H ABG380-7H locus 29.75 () Automated name-based View Maps
Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-7H ABG380-7H locus 49 () Automated name-based View Maps
ABG461a-7H locus 115.93 Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-7H ABG461a-7H locus 134.5 () Automated name-based View Maps
Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-7H ABG461a-7H locus 145.24 () Automated name-based View Maps
ABG476-7H locus 72.63 Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-7H ABG476-7H locus 104.81 () Automated name-based View Maps
ABG701-7H locus 66.65 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H ABG701 locus 74.52 () Automated name-based View Maps
Barley - Barley, GxH - Hordeum-GxH-7H ABG701 locus 10.67 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H ABG701 locus 76.1 () Automated name-based View Maps
Barley - Barley, GxHN, SFNB - Hordeum-GxHN-SFNB-7H ABG701 locus 13 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-7H ABG701 locus 1.6 () Automated name-based View Maps
Barley - Barley, KxM - Hordeum-KxM-7H ABG701 locus 69.6 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-7H ABG701 locus 76.4 () Automated name-based View Maps
Barley - Barley, Pilot OPA1, Consensus - Hordeum-PilotOPA1-7H ABG701 locus 66.31 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-7H ABG701 locus 68.82 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-7H ABG701 locus 74.52 () Automated name-based View Maps
Barley - Barley, AxK - Hordeum-AxK-7H ABG701 locus 75.1 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-7H ABG701 locus 70.3 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-7H ABG701 locus 111.5 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-7H ABG701 locus 75 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H ABG701 locus 82.73 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-7H ABG701 locus 75 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 ABG701 locus 82.73 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H ABG701 locus 93.97 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-7H ABG701 locus 72.6 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H ABG701 locus 82.73 () Automated name-based View Maps
ABG704-7H locus 1.11 Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-7H ABG704-7H locus 0 () Automated name-based View Maps
Amy2-7H locus 78.12 Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-7H Amy2 locus 86.47 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-7H Amy2 locus 6.2 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H Amy2 locus 86.47 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-7H Amy2 locus 85.6 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H Amy2 locus 94.8 () Automated name-based View Maps
Barley - Barley, Pilot OPA1, Consensus - Hordeum-PilotOPA1-7H Amy2 locus 85 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-7H Amy2 locus 99.3 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-7H Amy2 locus 80.8 () Automated name-based View Maps
Barley - Barley, SxM basemap - Hordeum-SxM-base-7H Amy2 locus 94.7 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H Amy2 locus 94.8 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSAP - Hordeum-SxM-SSAP-7H Amy2 locus 88.5 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 Amy2 locus 94.8 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-7H Amy2 locus 82.7 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H Amy2 locus 126.28 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H Amy2 locus 88.1 () Automated name-based View Maps
Barley - Barley genes 2 - Hordeum-Genes2-7H Amy2 locus -6 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-7H Amy2 locus 97.8 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-7H Amy2 locus 99.3 () Automated name-based View Maps
Bmag507-7H locus 73.72 No other positions
ksuA1a-7H locus 37.24 Barley - Barley, CxS - Hordeum-CxS-5H ksuA1 locus 96.64 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H ksuA1 locus 86.3 () Automated name-based View Maps
Barley - Barley, GxH - Hordeum-GxH-5H ksuA1 locus 107.56 () Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-19+27 ksuA1 locus 20 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B ksuA1 locus 39.3 () Automated name-based View Maps
MWG089-7H locus 25.62 Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-7H MWG089-7H locus 49.01 () Automated name-based View Maps
MWG555a-7H locus 4.41 Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-7H MWG555a-7H locus 8.9 () Automated name-based View Maps
MWG836-7H locus 41.27 Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-7H MWG836-7H locus 66.8 () Automated name-based View Maps
Ubi1-7H locus 90.65 No other positions
WG380a-7H locus 116.06 Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-7H WG380a-7H locus 138.33 () Automated name-based View Maps
WG789a-7H locus 23.71 No other positions
GBR0399-7H locus 0 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-7H GBR0399-7H locus 0 () Automated name-based View Maps
GBR1397-7H locus 1.32 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-7H GBR1397-7H locus 2.7 () Automated name-based View Maps
GBM1126-7H locus 1.71 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-7H GBM1126-7H locus 2.7 () Automated name-based View Maps
GBR0961-7H locus 3.17 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-7H GBR0961-7H locus 4.4 () Automated name-based View Maps
GBS0567-7H locus 3.28 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-7H GBS0567-7H locus 4.5 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.