*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, USDA Core, 2014 Consensus
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Barley-Core-2014_4H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, USDA Core, 2014 Consensus [ View Map Set Info ]
Map Name: Barley-Core-2014_4H
Map Start: 0
Map Stop: 129.68
Features by Type:
586 locus
586 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 586.       Previous | of 24 | Next
Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_4H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
BOPA2_12_30889 locus 122.96 No other positions
BOPA2_12_30476 locus 122.96 No other positions
BOPA1_11_20007 locus 122.96 No other positions
BOPA1_11_10610 locus 122.96 No other positions
BOPA2_12_20760 locus 121.74 No other positions
BOPA2_12_21450 locus 121.74 No other positions
BOPA1_11_20224 locus 121.74 No other positions
SCRI_RS_188829 locus 121.03 Barley - Barley, 2012 9KSNP v2 - Barley2012_9KSNPv2-4H SCRI_RS_188829 locus 115.2 (cM) Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_188829 locus 115.2 () Automated name-based View Maps
SCRI_RS_229116 locus 120.93 Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_229116 locus 115.1 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP v2 - Barley2012_9KSNPv2-4H SCRI_RS_229116 locus 115.1 (cM) Automated name-based View Maps
SCRI_RS_151357 locus 120.73 Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_151357 locus 114.9 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP v2 - Barley2012_9KSNPv2-4H SCRI_RS_151357 locus 114.9 (cM) Automated name-based View Maps
SCRI_RS_99965 locus 120.53 Barley - Barley, 2012 9KSNP v2 - Barley2012_9KSNPv2-4H SCRI_RS_99965 locus 114.7 (cM) Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_99965 locus 114.7 () Automated name-based View Maps
SCRI_RS_9164 locus 120.53 Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_9164 locus 113.7 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP v2 - Barley2012_9KSNPv2-4H SCRI_RS_9164 locus 113.7 (cM) Automated name-based View Maps
BOPA1_11_21534 locus 120.53 No other positions
BOPA1_11_21210 locus 120.53 No other positions
BOPA1_11_21130 locus 120.53 No other positions
BOPA1_11_10269 locus 120.53 No other positions
BOPA2_12_30146 locus 119.28 No other positions
BOPA1_11_10697 locus 117.33 No other positions
BOPA1_11_11066 locus 117.13 No other positions
SCRI_RS_192456 locus 117.13 Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_192456 locus 111.3 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP v2 - Barley2012_9KSNPv2-4H SCRI_RS_192456 locus 111.3 (cM) Automated name-based View Maps
SCRI_RS_107762 locus 117.13 Barley - Barley, 2012 9KSNP v2 - Barley2012_9KSNPv2-4H SCRI_RS_107762 locus 111.3 (cM) Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_107762 locus 111.3 () Automated name-based View Maps
BOPA1_11_21035 locus 117.13 No other positions
BOPA1_11_20883 locus 117.13 No other positions
BOPA1_11_10611 locus 117.13 No other positions
BOPA2_12_11235 locus 114.98 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.