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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, VGxA
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-Giese1-3H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, VGxA [ View Map Set Info ]
Map Name: Hordeum-Giese1-3H
Map Start: 0
Map Stop: 10
Features by Type:
3 locus
3 Total

Map Features

Restrict by Map:
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[ Download Feature Correspondence Data ]
Items 1 to 3 of 3.
Barley - Barley, VGxA - Hordeum-Giese1-3H
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Prx7 locus 1 Rye - Rye, P87 x P105, update - Secale-PxP-update-1R Prx7 locus 60.6 () Automated name-based View Maps
Rye - Rye_2009_consensus - Rye-2009-Consensus-1R Prx7 locus 37.5 () Automated name-based View Maps
Barley - Barley, VGxA - Hordeum-Giese1-2H Prx7 locus 79 () Automated name-based View Maps
Est4 locus 10 Rye - Rye, P87 x P105, update - Secale-PxP-update-5R Est4 locus 112.2 () Automated name-based View Maps
Rye - Rye_2009_consensus - Rye-2009-Consensus-5R Est4 locus 46.9 () Automated name-based View Maps
Barley - Barley, AxK - Hordeum-AxK-3H Est4 locus 155 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H Est4 locus 177.7 () Automated name-based View Maps
Prx5 locus 0 Barley - Barley, VGxTP - Hordeum-Giese2-3H Prx5 locus 238 () Automated name-based View Maps

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