*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, VGxTP
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-Giese2-3H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, VGxTP [ View Map Set Info ]
Map Name: Hordeum-Giese2-3H
Map Start: 0
Map Stop: 247
Features by Type:
15 locus
15 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 15 of 15.
Barley - Barley, VGxTP - Hordeum-Giese2-3H
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
cdo395 locus 88 Wheat D - T.tauschii - Tt-Gill-3D cdo395 locus 141.2 () Automated name-based View Maps
Wheat ABD - 3B Physical - Physical-3B cdo395 locus 36.23 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H cdo395 locus 30.7 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg03 CDO395 locus 134.4 () Automated name-based View Maps
Barley - Barley, HxT - Hordeum-NABGMP2-3H cdo395 locus 5.6 () Automated name-based View Maps
Oat - Oat, OxT - Oat-OxT-2 cdo395 locus 85.9 () Automated name-based View Maps
Oat - Oat, MxN, genetic 2005 - Oat-MxN_2005-19 cdo395 locus 30.4 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H cdo395 locus 15.4 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-3 CDO395 locus 134.4 () Automated name-based View Maps
Barley - Barley, HxT basemap - Hordeum-HxT-base-3H cdo395 locus 5.7 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H cdo395 locus -30.5 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H cdo395 locus 27 () Automated name-based View Maps
Oat - Oat-2007-OxT-PcQTL - Oat-2007-OxT_2 CDO395 locus 86.6 (cM) Automated name-based View Maps
Oat - Oat-2002-OxT-QTL - Oat-2002-OxT-QTL_2 cdo395 locus 81.5 (cM) Automated name-based View Maps
WG110 locus 190 Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-3H WG110 locus 162.6 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H WG110 locus 146.6 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H WG110 locus 92.3 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-3H WG110 locus 94.5 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-3H WG110 locus 124.59 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-3H WG110 locus 101.7 () Automated name-based View Maps
Barley - Barley, IxT/QTL - Hordeum-IxT/Q-3H Xwg110 locus 86.7 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 WG110 locus 124.09 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-3H WG110 locus 116.32 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4B wg110 locus 37.4 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H WG110 locus 62.5 () Automated name-based View Maps
Barley - Barley, GxH - Hordeum-GxH-3H WG110 locus 199.41 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-3H WG110 locus 162.6 () Automated name-based View Maps
Barley - Barley, CxS - Hordeum-CxS-3H WG110 locus 190.94 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-3H WG110 locus 177.1 () Automated name-based View Maps
Barley - Barley, SxM basemap - Hordeum-SxM-base-3H WG110 locus 144.8 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H WG110 locus 128.8 () Automated name-based View Maps
Barley - Barley, KxM - Hordeum-KxM-3H WG110 locus 113.3 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H WG110 locus 128.7 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-3H WG110 locus 113.95 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H WG110 locus 124.09 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H WG110 locus 124.09 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSAP - Hordeum-SxM-SSAP-3H WG110 locus 135.2 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H WG110 locus 116.32 () Automated name-based View Maps
Est1 locus 247 Barley - Barley genes 2 - Hordeum-Genes2-3H Est1 locus -105 () Automated name-based View Maps
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-3A Est1 locus -0.9 () Automated name-based View Maps
Rye - Rye, Hannover - Secale-Wricke-5R Est1 locus 40.1 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H Est1 locus 170.2 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H Est1 locus 173.2 () Automated name-based View Maps
CDO1174 locus 4 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A cdo1174 locus 40.4 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3A cdo1174 locus 87.28 (cM) Automated name-based View Maps
Diploid oat - Oat-2006-LAG211 - Oat-2006-LAG211_8 cdo1174 locus 12 () Automated name-based View Maps
Oat - Oat-2010-MxN_PcQTL - Oat-2010-MxN_9 cdo1174 locus 30.9 (cM) Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H CDO1174 locus 44.8 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H CDO1174 locus 0.1 () Automated name-based View Maps
Barley - Barley, PxN - Hordeum-Heun-3H Xcnl.CDO1174 locus 21.2 () Automated name-based View Maps
Oat - Oat-2013-MxN-RGA - Oat-2013-MxN-RGA_MN9 cdo1174 locus 30.9 (cM) Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H CDO1174 locus 69 () Automated name-based View Maps
Oat - Oat, MxN, genetic 2005 - Oat-MxN_2005-9 CDO1174 locus 31.2 () Automated name-based View Maps
MWG595 locus 104 Barley - Barley consensus 2 - Barley-Consensus2-3H MWG595 locus 44 () Automated name-based View Maps
Barley - Barley, VxHs - Hordeum-Graner1-3H MWG595 locus 106 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H MWG595 locus 64 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H MWG595 locus 0.9 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H MWG595 locus 52.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H MWG595 locus 45.59 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H MWG595 locus 55.9 () Automated name-based View Maps
Wheat ABD - Triticeae consensus - Triticeae-Sorrells-3-update Xmwg595-3 locus 52.2 () Automated name-based View Maps
MWG812 locus 111 Barley - Barley consensus - Barley-Consensus-3H MWG812 locus 7.4 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H MWG812 locus 52.1 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H MWG812 locus 65.76 () Automated name-based View Maps
Barley - Barley, physical - Hordeum-Physical-RFLP-3H MWG812 locus 95.2 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H MWG812 locus 62.6 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H MWG812 locus 79 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H MWG812 locus 76.8 () Automated name-based View Maps
cMWG691 locus 54 Barley - Barley consensus 2 - Barley-Consensus2-3H cMWG691 locus 5 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H cMWG691 locus 4.9 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H cMWG691 locus 0 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H cMWG691 locus 16.1 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-3H cMWG691-3H locus 19.6 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H cMWG691 locus 12.72 () Automated name-based View Maps
Barley - Barley, physical - Hordeum-Physical-RFLP-3H cMWG691 locus 0 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-3H cMWG691 locus 3.44 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H cMWG691 locus 26.6 () Automated name-based View Maps
MWG803 locus 190 Barley - Barley, BinMap 2005 - Hordeum-Bins-3H MWG803 locus 146 () Automated name-based View Maps
Wheat ABD - Triticeae consensus - Triticeae-Sorrells-3-update Xmwg803-3 locus 76.8 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H MWG803 locus 88.9 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H MWG803 locus 109.9 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H MWG803 locus 56.9 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H MWG803 locus 126.9 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H MWG803 locus 114.83 () Automated name-based View Maps
Barley - Barley, physical - Hordeum-Physical-RFLP-3H MWG803 locus 145.1 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-3H MWG803 locus 106.5 () Automated name-based View Maps
MWG932 locus 173 Barley - Barley, IxF - Hordeum-Graner2-3H MWG932 locus 118.9 () Automated name-based View Maps
Rye - Rye, Hannover - Secale-Wricke-3R MWG932 locus 76 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H MWG932 locus 122.37 () Automated name-based View Maps
Rye - Rye, N6 x N2, 2004 - Secale-N6xN2-2004-3R Xmwg932-3R locus 106.1 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H MWG932 locus 96.6 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H MWG932 locus 156 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H MWG932 locus 66.6 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H MWG932 locus 134 () Automated name-based View Maps
MWG969 locus 222 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H MWG969 locus 148.6 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H MWG969 locus 87 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H MWG969 locus 141.5 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H MWG969 locus 113.2 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H MWG969 locus 160 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H MWG969 locus 137.69 () Automated name-based View Maps
Prx5 locus 238 Barley - Barley, VGxA - Hordeum-Giese1-3H Prx5 locus 0 () Automated name-based View Maps
Xris19b locus 0 No other positions
MWG555 locus 117 Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-7H MWG555 locus 0 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H MWG555b locus 61.9 () Automated name-based View Maps
Barley - Barley, HxT - Hordeum-NABGMP2-7H MWG555 locus 4.1 () Automated name-based View Maps
MWG571 locus 126 Barley - Barley consensus 2 - Barley-Consensus2-3H MWG571a locus 70.1 () Automated name-based View Maps
Prx6 locus 238 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.