*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, Zhedar2, FHB QTL
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-Zhedar2-FHB-QTL-1H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, Zhedar2, FHB QTL [ View Map Set Info ]
Map Name: Hordeum-Zhedar2-FHB-QTL-1H
Map Start: 0
Map Stop: 182
Features by Type:
29 locus
3 qtl
32 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 32.       of 2 | Next
Barley - Barley, Zhedar2, FHB QTL - Hordeum-Zhedar2-FHB-QTL-1H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
ABG055 locus 166.5 Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-1H ABG055 locus 158 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-1H ABG055 locus 156 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-1H ABG055 locus 147.9 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-1H ABG055 locus 147.46 () Automated name-based View Maps
Barley - Barley genes - Hordeum-Genes-1H ABG055 locus -58.7 () Automated name-based View Maps
Barley - Barley, AxK - Hordeum-AxK-1H ABG055 locus 145.9 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-1H ABG055 locus 147.46 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-1H ABG055 locus 147.9 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-1 ABG055 locus 147.46 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H ABG055 locus 138.3 () Automated name-based View Maps
ABG373 locus 155.6 Wheat D - T.tauschii - Tt-Gill-1D ABG373 locus 136.5 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-1H ABG373 locus 180.42 () Automated name-based View Maps
Barley - Barley, Dicktoo x Morex - Hordeum-DxM-1H ABG373 locus 175.3 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-1H ABG373 locus 153.31 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-1H ABG373 locus 154 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1A Xabg373.1 locus 52 () Automated name-based View Maps
Barley - Barley, CxS - Hordeum-CxS-1H ABG373 locus 251.07 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-1H ABG373 locus 144.2 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-1 ABG373 locus 145.53 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-1H ABG373 locus 147.3 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H ABG373 locus 138.6 () Automated name-based View Maps
Barley - Barley, GxH - Hordeum-GxH-1H ABG373 locus 235.1 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A abg373 locus 27.6 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-1H ABG373 locus 106.4 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-1H ABG373 locus 145.53 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B abg373 locus 33.2 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-1H ABG373 locus 145.53 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-1H ABG373 locus 115.9 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-1H ABG373 locus 136.75 () Automated name-based View Maps
ABC156 locus 27.8 Barley - Barley, CxH - Hordeum-CxH-6H ABC156 locus 80.49 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B abc156 locus 14 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1D abc156 locus 15.1 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A abc156 locus 22.7 () Automated name-based View Maps
Wheat D - 1DS, Ae. tauschii - 1DS, Ae. tauschii Xabc156-1D locus 38.3 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-7H ABC156 locus -13.1 () Automated name-based View Maps
Barley - Barley, Dicktoo x Morex - Hordeum-DxM-2H ABC156 locus 17.6 () Automated name-based View Maps
Bmac213 locus 22.4 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-1H Bmac213 locus 25.1 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-1H Bmac213 locus 19.4 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-1H Bmac213 locus 52.3 () Automated name-based View Maps
Barley - Barley, Igri x Franka, SSR - Hordeum-IxF-SSR-1H Bmac213 locus 18.6 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-1H Bmac0213 locus 38.08 () Automated name-based View Maps
Bmag105 locus 69.8 Barley - Barley consensus 2003 - Barley-consensus-2003-5H Bmag105 locus 22.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-1H Bmag105 locus 66.2 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-1H Bmag0105 locus 72.89 () Automated name-based View Maps
Bmag382 locus 133.7 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-1H Bmag382 locus 100.2 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-1H Bmag0382 locus 85.9 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-1H Bmag382 locus 99.69 () Automated name-based View Maps
Barley - Barley, Igri x Franka, SSR - Hordeum-IxF-SSR-1H Bmag382 locus 81.4 () Automated name-based View Maps
ABG387 locus 182 Barley - Barley consensus 2 - Barley-Consensus2-1H ABG387a locus 149.8 () Automated name-based View Maps
Barley - Barley, Dicktoo x Morex - Hordeum-DxM-6H ABG387 locus 39.8 () Automated name-based View Maps
Barley - Barley, DxM, Dhn genes - Hordeum-DxM-Dnh-6H ABG387 locus 39.8 () Automated name-based View Maps
M8E3-5 locus 0 No other positions
M1E6-3 locus 9.9 No other positions
M2E8-6 locus 21.1 No other positions
M4E4-7 locus 37.3 No other positions
M8E4-5 locus 43.6 No other positions
M5E8-5 locus 46.7 No other positions
M3E1-9 locus 50.7 No other positions
M4E3-22 locus 57.1 No other positions
M2E7-2 locus 68.3 No other positions
M6E8-4 locus 71.1 No other positions
M2E3-12 locus 72.4 No other positions
M4E4-5 locus 73.7 No other positions
M3E7-1 locus 75.3 No other positions
M5E3-6 locus 81.8 No other positions
PTO2 locus 89.9 No other positions
M5E6-2 locus 111.2 No other positions
M6E5-1 locus 124.1 No other positions
M8E8-4 locus 135 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.