*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, Zhedar2, FHB QTL
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-Zhedar2-FHB-QTL-4H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, Zhedar2, FHB QTL [ View Map Set Info ]
Map Name: Hordeum-Zhedar2-FHB-QTL-4H
Map Start: 0
Map Stop: 157.7
Features by Type:
17 locus
17 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 17 of 17.
Barley - Barley, Zhedar2, FHB QTL - Hordeum-Zhedar2-FHB-QTL-4H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Bmac0181 locus 99.3 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-4H Bmac0181 locus 58.51 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-4H Bmac0181 locus 51.88 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-4 Bmac0181 locus 51.88 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-4H Bmac0181 locus 44.55 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-4H Bmac0181 locus 51.88 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-4H Bmac0181 locus 56.3 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-4H Bmac0181 locus 46 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H Bmac0181 locus 65.5 () Automated name-based View Maps
ABC303 locus 63.9 Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-4H ABC303 locus 39.5 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-4H ABC303 locus 43.61 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-4H ABC303 locus 44.38 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-4H ABC303 locus 55.1 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-4H ABC303 locus 61.2 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-4H ABC303 locus 55.1 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-4H ABC303 locus 46.7 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-4H ABC303 locus 49.2 () Automated name-based View Maps
Barley - Barley, KxM - Hordeum-KxM-4H ABC303 locus 78.7 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-4H ABC303 locus 42.9 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-4H ABC303 locus 44.38 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-4H ABC303 locus 43.4 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-4H ABC303 locus 40.8 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H ABC303 locus 60.2 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-4H ABC303 locus -7 () Automated name-based View Maps
Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-4H ABC303-4H locus 44.02 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H ABC303 locus 50.3 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-4H ABC303 locus 50.3 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-4H ABC303 locus 48.4 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-4 ABC303 locus 44.38 () Automated name-based View Maps
HVM40 locus 0 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-4H HVM40 locus 22.4 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-4 HVM40 locus 19.18 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H HVM40 locus 32.3 () Automated name-based View Maps
Barley - Barley, HxM/QTL - Hordeum-HxM-base-4H HVM40 locus 35.7 () Automated name-based View Maps
Barley - Barley, AxHs/QTL - Hordeum-Pillen-4H HVM40 locus 14 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-4H HVM0040 locus 18.7 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-4H HVM40 locus 14 () Automated name-based View Maps
Barley - Barley, Cali-sib x BowmanBC, QTL - Hordeum-CxB-4H HVM40 locus 0 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-4H HVM40 locus 6 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-4H HVM40 locus 24.4 () Automated name-based View Maps
Barley - Barley, Lx41 - Hordeum-Lx41-4H HVM40 locus 0 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-4H HVM40 locus 19.18 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-4H HVM40 locus 75.8 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-4H HVM40 locus 25.94 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-4H HVM40 locus 15.59 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-4H HVM40 locus 23.6 () Automated name-based View Maps
Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-4H HVM40 locus 4.42 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-4H HVM40 locus 19.18 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-4H HVM40 locus 22.2 () Automated name-based View Maps
Barley - Barley, HN x H602, Sato2009 - Hv-HNxH602-4H HVM40 locus 29.8 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-4H HVM40 locus 27 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H HVM40 locus 22.4 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-4H HVM40 locus 25.64 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-4H HVM40 locus 16.25 () Automated name-based View Maps
HVM68 locus 89.9 Barley - Barley, LxHs - Hordeum-LxHs-4H HVM68 locus 45 () Automated name-based View Maps
Barley - H. bulbosum, PB1 x PB11 - Hbulbosum-PB1xPB11-4 HVM68 locus 69 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-4H HVM68 locus 79.8 () Automated name-based View Maps
Barley - Barley, Cali-sib x BowmanBC, QTL - Hordeum-CxB-4H HVM68 locus 46.2 () Automated name-based View Maps
Barley - Barley, HxM/QTL - Hordeum-HxM-base-4H HVM68 locus 76.9 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-4H HVM68 locus 56.94 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-4H HVM68 locus 152.8 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-4H HVM68 locus 62.52 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-4H HVM0068 locus 70.1 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-4 HVM68 locus 56.94 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H HVM68 locus 76.2 () Automated name-based View Maps
Barley - Barley, AxHs/QTL - Hordeum-Pillen-4H HVM68 locus 45 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H HVM68 locus 62.52 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-4H HVM68 locus 61.72 () Automated name-based View Maps
Barley - Barley, HN x H602, Sato2009 - Hv-HNxH602-4H HVM68 locus 138.1 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-4H HVM68 locus 56.94 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-4H HVM68 locus 65.5 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-4H HVM68 locus 47.36 () Automated name-based View Maps
Bmag138 locus 157.7 Barley - Barley, Igri x Franka, SSR - Hordeum-IxF-SSR-4H Bmag138 locus 139.4 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H Bmag0138a locus 45.24 () Automated name-based View Maps
Bmag306 locus 104.8 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H Bmag0306b locus 117.44 () Automated name-based View Maps
M7E3-8 locus 4.5 No other positions
M2E8-5 locus 7.2 No other positions
M3E3-4 locus 52.6 No other positions
M7E8-3 locus 60.6 No other positions
M1E8-2 locus 61.9 No other positions
M5E5-2 locus 66.1 No other positions
HRCAbG locus 87.2 No other positions
CLRR3 locus 93.9 No other positions
Bmac701 locus 121.6 No other positions
M2E6-1 locus 130.9 No other positions
M8E8-2 locus 145.2 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.