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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, physical
(Reference Set)
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Correspondences
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Maps Hordeum-Physical-1H
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
chromband
rearrangement
Other
 
Show Labels: None Landmarks All
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Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, physical [ View Map Set Info ]
Map Name: Hordeum-Physical-1H
Map Start: -50
Map Stop: 72
Features by Type:
9 chromband
38 rearrangement
47 Total

Map Features

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Items 26 to 47 of 47.       Previous | of 2
Barley - Barley, physical - Hordeum-Physical-1H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
T52ad rearrangement 42 - 72 Barley - Barley, physical - Hordeum-Physical-RFLP-1H T52ad rearrangement 62 - 93.5 () Automated name-based View Maps
T57ag rearrangement 33 - 49 Barley - Barley, physical - Hordeum-Physical-RFLP-1H T57ag rearrangement 62 - 63.5 () Automated name-based View Maps
T57af rearrangement 29 - 62 No other positions
T57ao rearrangement 29 - 62 Barley - Barley, physical - Hordeum-Physical-RFLP-1H T57ao rearrangement 62 - 63.5 () Automated name-based View Maps
T54af rearrangement 29 - 62 Barley - Barley, physical - Hordeum-Physical-RFLP-1H T54af rearrangement 62 - 63.5 () Automated name-based View Maps
T56z rearrangement 29 - 59 Barley - Barley, physical - Hordeum-Physical-RFLP-1H T56z rearrangement 62 - 72.4 () Automated name-based View Maps
T54ad rearrangement 29 - 41 Barley - Barley, physical - Hordeum-Physical-RFLP-1H T54ad rearrangement 62 - 63.5 () Automated name-based View Maps
T52af rearrangement 12 - 21 Barley - Barley, physical - Hordeum-Physical-RFLP-1H T52af rearrangement 62 - 63.5 () Automated name-based View Maps
T54ah rearrangement 11 - 24 Barley - Barley, physical - Hordeum-Physical-RFLP-1H T54ah rearrangement 62 - 63.5 () Automated name-based View Maps
T57ap rearrangement 9 - 24 Barley - Barley, physical - Hordeum-Physical-RFLP-1H T57ap rearrangement 62 - 63.5 () Automated name-based View Maps
T56aa rearrangement 9 - 24 Barley - Barley, physical - Hordeum-Physical-RFLP-1H T56aa rearrangement 62 - 63.5 () Automated name-based View Maps
T54ac rearrangement 9 - 24 Barley - Barley, physical - Hordeum-Physical-RFLP-1H T54ac rearrangement 62 - 63.5 () Automated name-based View Maps
T53af rearrangement 9 - 24 Barley - Barley, physical - Hordeum-Physical-RFLP-1H T53af rearrangement 62 - 63.5 () Automated name-based View Maps
1H Centromere chromband -1 - 1 No other positions
1HS50 chromband -50 - -10 No other positions
1HS10 chromband -10 - -1 No other positions
1HS9 chromband 1 - 9 No other positions
1HL24 chromband 9 - 24 No other positions
1HL29 chromband 24 - 29 No other positions
1HL62 chromband 29 - 62 No other positions
1HL66 chromband 62 - 66 No other positions
1HL72 chromband 66 - 72 No other positions

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