*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat AB-Durum wheat, Kofa x UC1113
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Kofa/UC1113-3A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - Durum wheat, Kofa x UC1113 [ View Map Set Info ]
Map Name: Kofa/UC1113-3A
Map Start: 0
Map Stop: 130.9
Features by Type:
14 locus
14 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 14 of 14.
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-3A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xwmc532-3A locus 0 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3A Xwmc532-3A locus 15.6 () Automated name-based View Maps
Wheat ABD - Wheat_Yr76_2016 - Wheat_Yr76_2016-3A Xwmc532-3A locus 16.5 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3A Xwmc532-3A locus 5.7 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-3A Xwmc532-3A locus 9.3 () Automated name-based View Maps
Xcfa2234-3A locus 41.3 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3A Xcfa2234-3A locus 51.6 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3A Xcfa2234-3A locus 74.3 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-3A Xcfa2234-3A locus 88.7 () Automated name-based View Maps
Xcfa2193-3A locus 130.9 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3A Xcfa2193-3A locus 115.7 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3A Xcfa2193-3A locus 73.8 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-3A Xcfa2193-3A locus 143.8 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-3A Xcfa2193-3A locus 178.5 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-3A Xcfa2193-3A locus 75.8 () Automated name-based View Maps
Xwmc50-3A locus 28.2 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3A Xwmc50-3A locus 34.12 () Automated name-based View Maps
Xwmc505-3A locus 29.5 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3A Xwmc505-3A locus 34.71 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3A Xwmc505-3A locus 41.7 () Automated name-based View Maps
Xgwm666-3A locus 41.3 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-3A Xgwm666-3A locus 107.8 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-3A Xgwm666-3A locus -12 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3A Xgwm666-3A locus 45.4 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3A Xgwm666-3A locus 174 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3A Xgwm666-3A locus 0.21 () Automated name-based View Maps
Xbarc356-3A locus 40.6 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xbarc356-3A locus 57.7 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3A Xbarc356-3A locus 60.55 () Automated name-based View Maps
Xgwm369-3A locus 8.8 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-3A Xgwm369-3A locus 30.5 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-3A Xgwm369-3A locus 30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xgwm369-3A locus 29.9 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-3A Xgwm369-3A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Xgwm369-3A locus 10.05 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3A Xgwm369-3A locus -0.72 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3A Xgwm369-3A locus 31.3 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3A Xgwm369-3A locus 13.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3A Xgwm369-3A locus 11 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-3A Xgwm369-3A locus 23 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-3A Xgwm369-3A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3A Xgwm369-3A locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-3A Xgwm369-3A locus -58.4 () Automated name-based View Maps
Wheat ABD - Wheat_Yr76_2016 - Wheat_Yr76_2016-3A Xgwm369-3A locus 23.4 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xgwm369-3A locus 39.9 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3A Xgwm369-3A locus 21.5 () Automated name-based View Maps
Xcfa2163-3A locus 28.2 No other positions
Xbarc359-3A locus 40.6 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A barc359 locus 32.7 () Automated name-based View Maps
Xwmc625-3A locus 40.6 No other positions
Xksm28-3A locus 51.4 No other positions
Xwmc428-3A locus 64.4 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3A Xwmc428-3A locus 55.7 () Automated name-based View Maps
BF293500_113-3A locus 79.7 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.