*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat AB-Durum wheat, Kofa x UC1113
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Kofa/UC1113-7B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - Durum wheat, Kofa x UC1113 [ View Map Set Info ]
Map Name: Kofa/UC1113-7B
Map Start: 0.00
Map Stop: 199.30
Features by Type:
32 locus
7 qtl
39 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 39.       of 2 | Next
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-7B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xwmc476-7B locus 63.30 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-7B Xwmc476-7B locus 32.90 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7B Xwmc476-7B locus 60.00 () Automated name-based View Maps
Xgwm333-7B locus 70.80 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7B Xgwm333-7B locus 40.00 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-7B Xgwm333-7B locus 38.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7B Xgwm333-7B locus 32.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7B Xgwm333-7B locus 46.40 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7B Xgwm333-7B locus 62.50 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_7B Xgwm333-7B locus 0.48 () Automated name-based View Maps
Xwmc581-7B locus 183.40 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7B Xwmc581-7B locus 137.90 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-7B Xwmc581-7B locus 188.50 () Automated name-based View Maps
Xwmc276-7B locus 182.20 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7B Xwmc276-7B locus 194.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-7B Xwmc276-7B locus 194.50 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7B Xwmc276-7B locus 141.90 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-7B Xwmc276-7B locus 191.40 () Automated name-based View Maps
Xbarc176-7B locus 82.30 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7B Xbarc176-7B locus 68.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7B Xbarc176-7B locus 43.90 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-7B Xbarc176-7B locus 13.80 () Automated name-based View Maps
Xwmc273-7B locus 183.40 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-7B Xwmc273-7B locus 115.50 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7B Xwmc273-7B locus 142.70 () Automated name-based View Maps
Xgwm400-7B locus 23.10 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7B Xgwm400-7B locus -11.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7B Xgwm400-7B locus -4.60 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_7B Xgwm400-7B locus -0.14 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7B Xgwm400-7B locus 4.50 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7B Xgwm400-7B locus 40.00 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-7B Xgwm400-7B locus 84.00 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-7B Xgwm400-7B locus 22.00 () Automated name-based View Maps
Xgwm46-7B locus 53.10 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_7B Xgwm46-7B locus -0.64 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7B Xgwm46-7B locus 53.50 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-7B Xgwm46-7B locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7B Xgwm46-7B locus 24.95 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-7B Xgwm46-7B locus 40.40 () Automated name-based View Maps
Wheat ABD - Wheat, 2006, purple grain - Wheat_Sara29xPurpleFeed_2006-7B Xgwm46-7B locus 47.20 (cM) Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-7B Xgwm46-7B locus -13.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7B Xgwm46-7B locus 31.50 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-7B Xgwm46-7B locus 41.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7B Xgwm46-7B locus 24.00 () Automated name-based View Maps
Xgwm297-7B locus 62.50 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_7B Xgwm297-7B locus -0.14 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7B Xgwm297-7B locus 27.50 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-7B Xgwm297-7B locus 1.70 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7B Xgwm297-7B locus 58.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7B Xgwm297-7B locus 33.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7B Xgwm297-7B locus 38.80 () Automated name-based View Maps
Xcfa2040-7B locus 183.40 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7B Xcfa2040-7B locus 182.60 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7B Xcfa2040-7B locus 143.40 () Automated name-based View Maps
Xgwm146-7B locus 191.00 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7B Xgwm146-7B locus 141.60 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7B Xgwm146-7B locus 149.90 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-7B Xgwm146-7B locus 135.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_7B Xgwm146-7B locus 0.89 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7B Xgwm146-7B locus 123.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7B Xgwm146-7B locus 190.80 () Automated name-based View Maps
Xbarc279-7B locus 10.90 No other positions
Xgwm537-7B locus 20.80 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-7B Xgwm537-7B locus 11.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7B Xgwm537-7B locus -5.00 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7B Xgwm537-7B locus 35.20 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-7B Xgwm537-7B locus 73.40 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-7B Xgwm537-7B locus -61.00 () Automated name-based View Maps
Wheat ABD - Wheat, 2006, purple grain - Wheat_Sara29xPurpleFeed_2006-7B Xgwm537-7B locus 32.50 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7B Xgwm537-7B locus 0.00 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-7B Xgwm537-7B locus 49.30 () Automated name-based View Maps
Xwmc182-7B locus 38.70 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-7B Xwmc182-7B locus 57.60 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7B Xwmc182-7B locus 51.90 () Automated name-based View Maps
Xbarc23-7B locus 53.90 No other positions
Xbarc72-7B locus 59.20 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_7B Xbarc72-7B locus 0.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7B Xbarc72-7B locus 31.60 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7B Xbarc72-7B locus 54.20 () Automated name-based View Maps
Xbarc267-7B locus 63.30 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7B Xbarc267-7B locus 60.60 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_7B Xbarc267-7B locus 0.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7B Xbarc267-7B locus 33.30 () Automated name-based View Maps
Xwmc662-7B locus 63.30 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7B Xwmc662-7B locus 59.00 () Automated name-based View Maps
BF474379_496-7B locus 80.60 Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-7B BF474379_496-7B locus 98.00 () Automated name-based View Maps
Wheat AB - Wheat_AB, Kofa x UC1113 - Wheat_AB, Kofa x UC1113 7B_2 BF474379_496-7B locus 24.30 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 7B BF474379_496 locus 33.40 () Automated name-based View Maps
Xwmc396-7B locus 85.30 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7B Xwmc396-7B locus 67.30 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-7B Xwmc396-7B locus 27.70 () Automated name-based View Maps
Xbarc278-7B locus 108.40 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-7B Xbarc278-7B locus 10.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7B Xbarc278-7B locus 49.90 () Automated name-based View Maps
BE498985_42-7B locus 119.90 Wheat AB - Wheat_AB, Kofa x UC1113 - Wheat_AB, Kofa x UC1113 7B_2 BE498985_42-7B locus 48.70 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 7B BE498985_42 locus 46.30 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-7B BE498985_42-7B locus 120.90 () Automated name-based View Maps
Xwmc195-7B locus 124.50 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 7B wmc195 locus 46.50 () Automated name-based View Maps
Xwmc311-7B locus 163.40 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7B Xwmc311-7B locus 118.00 () Automated name-based View Maps
Xbarc1073-7B locus 184.60 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_7B Xbarc1073-7B locus 0.50 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.