*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat AB-Durum wheat, Kofa x UC1113
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Kofa/UC1113-2A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - Durum wheat, Kofa x UC1113 [ View Map Set Info ]
Map Name: Kofa/UC1113-2A
Map Start: 0
Map Stop: 162.6
Features by Type:
15 locus
15 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 15 of 15.
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-2A
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm122-2A locus 55.9 Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-2A Xgwm122-2A locus -17.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xgwm122-2A locus 78.9 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-2A Xgwm122-2A locus 114.3 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-2A Xgwm122-2A locus 448.29 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xgwm122-2A locus 96.5 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-2A Xgwm122-2A locus 103.2 () Automated name-based View Maps
Wheat ABD - Wheat, 2006, purple grain - Wheat_Novo67xPurpleFeed_2006-2A Xgwm122-2A locus 0 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2A Xgwm122-2A locus -0.39 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xgwm122-2A locus 112.6 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2A Xgwm122-2A locus 51.1 () Automated name-based View Maps
Xgwm515-2A locus 70 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xgwm515-2A locus 96.2 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-2A Xgwm515-2A locus 104.4 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-2A Xgwm515-2A locus 38.1 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2A Xgwm515-2A locus 51.7 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-2A Xgwm515-2A locus 91.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xgwm515-2A locus 77.9 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2A Xgwm515-2A locus -0.39 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xgwm515-2A locus 109.1 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-2A Xgwm515-2A locus 88.8 () Automated name-based View Maps
Xgwm328-2A locus 88.5 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2A Xgwm328-2A locus 58.3 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2A Xgwm328-2A locus -0.39 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xgwm328-2A locus 96.7 () Automated name-based View Maps
Wheat ABD - Wheat, 2006, purple grain - Wheat_Novo67xPurpleFeed_2006-2A Xgwm328-2A locus 22.8 (cM) Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-2A Xgwm328-2A locus 2 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-2A Xgwm328-2A locus 150.18 () Automated name-based View Maps
Wheat ABD - Wheat, 2006, purple grain - Wheat_Novo67xPurple_2006-2A Xgwm328-2A locus 7.4 (cM) Automated name-based View Maps
Wheat AB - Durum Wheat, Anthocyanin, 2010 - Tdurum_TRI15744xTRI2719-2A Xgwm328-2A locus 5.6 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xgwm328-2A locus 69.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xgwm328-2A locus 114.3 () Automated name-based View Maps
Xgdm93-2A locus 162.6 Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-2A Xgdm93-2A locus 80.6 () Automated name-based View Maps
Xcfd50-2A locus 145.5 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xcfd50-2A locus 23.5 () Automated name-based View Maps
Xgwm296-2A locus 22.8 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xgwm296-2A locus 8.45 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2A Xgwm296-2A locus -0.39 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2A Xgwm296-2A locus 13.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xgwm296-2A locus 43.6 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-2A Xgwm296-2A locus -85.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xgwm296-2A locus 56.7 () Automated name-based View Maps
Xgwm275-2A locus 66.6 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2A Xgwm275-2A locus 52.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xgwm275-2A locus 77.9 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-2A Xgwm275-2A locus 87.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xgwm275-2A locus 96.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xgwm275-2A locus 98.3 () Automated name-based View Maps
Wheat ABD - Wheat, 2006, purple grain - Wheat_Novo67xPurple_2006-2A Xgwm275-2A locus 0 (cM) Automated name-based View Maps
Wheat AB - Durum Wheat, Anthocyanin, 2010 - Tdurum_TRI15744xTRI2719-2A Xgwm275-2A locus 0 (cM) Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-2A Xgwm275-2A locus -23.7 () Automated name-based View Maps
Xgwm249-2A locus 71.3 Wheat ABD - Wheat_Yr79_2018 - Wheat_Yr79_2018-2AS Xgwm249-2A locus 16.2 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2A Xgwm249-2A locus 0.42 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xgwm249-2A locus 111.9 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2A Xgwm249-2A locus 52.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xgwm249-2A locus 79.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xgwm249-2A locus 95.8 () Automated name-based View Maps
Xwmc382-2A locus 0 Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-2A Xwmc382-2A locus 37.4 () Automated name-based View Maps
Wheat ABD - Wheat_Yr69_2016 - Wheat_Yr69_2016-2A Xwmc382-2A locus 6.8 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2A Xwmc382-2A locus 6 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-2A Xwmc382-2A locus 23.6 () Automated name-based View Maps
Xwmc296-2A locus 55.2 Wheat ABD - Wheat_Yr79_2018 - Wheat_Yr79_2018-2AS Xwmc296-2A locus 0 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2A Xwmc296-2A locus 48.8 () Automated name-based View Maps
Xbarc309-2A locus 65.8 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xbarc309-2A locus 82.9 () Automated name-based View Maps
Xgwm71-2A locus 79 Wheat A - T. boeoticum x monococcum - T.b.xT.m.-2A Xgwm71-2A locus 94.7 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2A Xgwm71-2A locus 55.7 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-2A Xgwm71-2A locus -3.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xgwm71-2A locus 75.6 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-2A Xgwm71-2A locus 97 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-2A Xgwm71-2A locus 17.7 () Automated name-based View Maps
Xbarc220-2A locus 79 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2A Xbarc220-2A locus 0.42 () Automated name-based View Maps
Xwmc401-2A locus 80.2 No other positions
Xgwm526-2A locus 162.6 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2A Xgwm526-2A locus 186.3 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.