*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat AB-Durum wheat, Kofa x UC1113
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Kofa/UC1113-3B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)




Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - Durum wheat, Kofa x UC1113 [ View Map Set Info ]
Map Name: Kofa/UC1113-3B
Map Start: 0.00
Map Stop: 190.00
Features by Type:
21 locus
21 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 21 of 21.
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-3B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xbarc147-3B locus 7.30 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3B Xbarc147-3B locus 14.79 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3B Xbarc147-3B locus 16.10 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3B Xbarc147-3B locus 10.60 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xbarc147-3B locus -0.89 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xbarc147-3B locus 7.20 () Automated name-based View Maps
Xgwm493-3B locus 13.00 Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-3B Xgwm493-3B locus -43.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3B Xgwm493-3B locus 21.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3B Xgwm493-3B locus 19.40 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-3B Xgwm493-3B locus 12.50 () Automated name-based View Maps
Wheat ABD - Wheat, FHB QTL, Physical - Triticum-FHB-QTL-physical-3BS Xgwm493-3B locus -83.00 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3B Xgwm493-3B locus 19.90 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xgwm493-3B locus -0.89 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-3B Xgwm493-3B locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-3B Xgwm493-3B locus 13.30 () Automated name-based View Maps
Wheat ABD - Wheat, NxB, FHB QTL - Triticum-NxB-FHB-QTL/2003-3BS Xgwm493-3B locus 18.00 () Automated name-based View Maps
Wheat ABD - Wheat, SxS, FHB QTL, 2003 - Triticum-SxS-FHB-QTL/2003-3BS Xgwm493-3B locus 34.00 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xgwm493-3B locus 11.80 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3B Xgwm493-3B locus 75.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3B Xgwm493-3B locus 35.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3B Xgwm493-3B locus 19.70 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-3B Xgwm493-3B locus 0.00 () Automated name-based View Maps
Xgwm285-3B locus 107.50 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xgwm285-3B locus 60.90 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3B Xgwm285-3B locus 85.30 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-3B Xgwm285-3B locus 65.50 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3B Xgwm285-3B locus 59.86 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xgwm285-3B locus -0.16 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3B Xgwm285-3B locus 65.30 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-3B Xgwm285-3B locus 48.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3B Xgwm285-3B locus 211.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3B Xgwm285-3B locus 118.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3B Xgwm285-3B locus 80.70 () Automated name-based View Maps
Xgwm389-3B locus 0.00 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3B Xgwm389-3B locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3B Xgwm389-3B locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3B Xgwm389-3B locus 3.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3B Xgwm389-3B locus 5.00 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-3B Xgwm389-3B locus -81.10 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-3B Xgwm389-3B locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3B Xgwm389-3B locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, FHB QTL, Physical - Triticum-FHB-QTL-physical-3BS Xgwm389-3B locus -95.00 () Automated name-based View Maps
Wheat ABD - Wheat, SxS, FHB QTL, 2003 - Triticum-SxS-FHB-QTL/2003-3BS Xgwm389-3B locus 8.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3B Xgwm389-3B locus 4.70 () Automated name-based View Maps
Wheat ABD - Wheat, NxC, FHB QTL - Triticum-NxC-FHB-QTL-3BS Xgwm389-3B locus 45.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3B Xgwm389-3B locus 1.70 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xgwm389-3B locus -0.68 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-3B Xgwm389-3B locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, NxB, FHB QTL - Triticum-NxB-FHB-QTL/2003-3BS Xgwm389-3B locus 0.00 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3B Xgwm389-3B locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xgwm389-3B locus 0.70 () Automated name-based View Maps
Xcfd79-3B locus 22.00 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xcfd79-3B locus 14.50 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xcfd79-3B locus -0.16 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3B Xcfd79-3B locus 30.09 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-3B Xcfd79-3B locus 41.20 () Automated name-based View Maps
Xbarc164-3B locus 136.90 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-3B Xbarc164-3B locus 83.80 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3B Xbarc164-3B locus 68.14 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xbarc164-3B locus 70.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3B Xbarc164-3B locus 81.50 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xbarc164-3B locus 0.56 () Automated name-based View Maps
Xwmc43-3B locus 43.40 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3B Xwmc43-3B locus 61.20 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xwmc43-3B locus 48.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-3B Xwmc43-3B locus 65.30 () Automated name-based View Maps
Xgwm114-3B locus 190.00 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3B Xgwm114-3B locus 229.40 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xgwm114-3B locus 0.11 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3B Xgwm114-3B locus 364.30 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xgwm114-3B locus 125.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3B Xgwm114-3B locus 126.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3B Xgwm114-3B locus 187.70 () Automated name-based View Maps
Xgwm181-3B locus 179.40 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3B Xgwm181-3B locus 199.80 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-3B Xgwm181-3B locus 192.30 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xgwm181-3B locus 139.30 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xgwm181-3B locus 0.82 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3B Xgwm181-3B locus 253.40 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3B Xgwm181-3B locus 220.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3B Xgwm181-3B locus 397.70 () Automated name-based View Maps
Xpsr454-3B locus 180.00 Wheat ABD - Wheat, Gale - Ta-Gale-3B Xpsr454-3B locus 95.10 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3B Xpsr454-3B locus 69.60 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-3B Xpsr454-3B locus 36.60 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3B Xpsr454-3B locus 164.80 () Automated name-based View Maps
Xgwm547-3B locus 180.00 Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-3B Xgwm547-3B locus 272.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3B Xgwm547-3B locus 249.50 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xgwm547-3B locus 137.70 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xgwm547-3B locus 0.82 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3B Xgwm547-3B locus 372.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3B Xgwm547-3B locus 135.50 () Automated name-based View Maps
BF293133_75-3B locus 13.00 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B BF293133_75 locus 14.80 () Automated name-based View Maps
Wheat AB - Wheat_AB, Kofa x UC1113 - Wheat_AB, Kofa x UC1113 3B_1 BF293133_75-3B locus 7.60 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-3B BF293133_75-3B locus 12.40 () Automated name-based View Maps
Xksm45-3B locus 34.80 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B ksm45 locus 29.80 () Automated name-based View Maps
Xwmc625-3B locus 107.50 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xwmc625-3B locus 59.40 () Automated name-based View Maps
Xbarc73-3B locus 107.50 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xbarc73-3B locus 59.80 () Automated name-based View Maps
Wheat ABD - Wheat, SxS, FHB QTL, 2003 - Triticum-SxS-FHB-QTL/2003-3BS Xbarc73-3B locus 97.00 () Automated name-based View Maps
Wheat ABD - Wheat, NxB, FHB QTL - Triticum-NxB-FHB-QTL/2003-3BS Xbarc73-3B locus 73.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xbarc73-3B locus -0.45 () Automated name-based View Maps
Wheat ABD - Wheat, FHB QTL, Physical - Triticum-FHB-QTL-physical-3BS Xbarc73-3B locus -45.00 () Automated name-based View Maps
Xksm151-3B locus 112.80 No other positions
Xgwm66-3B locus 114.20 No other positions
Xcfa2134-3B locus 116.30 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xcfa2134-3B locus 75.40 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3B Xcfa2134-3B locus 72.70 () Automated name-based View Maps
BQ159467_233-3B locus 119.80 Wheat AB - Wheat_AB, Kofa x UC1113 - Wheat_AB, Kofa x UC1113 3B_2 BQ159467_233-3B locus 0.00 () Automated name-based View Maps
Xcnl62-3B locus 179.40 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B cnl62 locus 100.00 () Automated name-based View Maps
Xgwm247-3B locus 180.00 Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3B Xgwm247-3B locus 393.10 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3B Xgwm247-3B locus 328.60 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-3B Xgwm247-3B locus 319.30 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xgwm247-3B locus 141.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3B Xgwm247-3B locus 253.20 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.