*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat AB-Durum wheat, Kofa x UC1113
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Kofa/UC1113-6B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - Durum wheat, Kofa x UC1113 [ View Map Set Info ]
Map Name: Kofa/UC1113-6B
Map Start: 0
Map Stop: 139
Features by Type:
14 locus
1 qtl
15 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 15 of 15.
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-6B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm219-6B locus 115.5 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xgwm219-6B locus 59.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6B Xgwm219-6B locus 98.7 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-6B Xgwm219-6B locus 168.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6B Xgwm219-6B locus 73.4 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6B Xgwm219-6B locus 47.7 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6B Xgwm219-6B locus 56.3 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6B Xgwm219-6B locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6B Xgwm219-6B locus 105.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xgwm219-6B locus 62.6 () Automated name-based View Maps
Xbarc354-6B locus 76.4 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xbarc354-6B locus 48.8 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-6B Xbarc354-6B locus 72.42 () Automated name-based View Maps
Xgwm613-6B locus 0.6 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xgwm613-6B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6B Xgwm613-6B locus -11.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6B Xgwm613-6B locus -5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xgwm613-6B locus 7.7 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-6B Xgwm613-6B locus 14.4 () Automated name-based View Maps
Xwmc105-6B locus 60.4 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6B Xwmc105-6B locus 48.2 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xwmc105-6B locus 40.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-6B Xwmc105-6B locus 57.1 () Automated name-based View Maps
Xbarc14-6B locus 46.1 Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-6B Xbarc14-6B locus 64.3 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6B Xbarc14-6B locus 22.1 () Automated name-based View Maps
Xbarc101-6B locus 53.4 Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-6B Xbarc101-6B locus 86.4 () Automated name-based View Maps
Xbarc79-6B locus 79.5 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xbarc79-6B locus 44.6 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-6B Xbarc79-6B locus 105.3 () Automated name-based View Maps
Xksm45-6B locus 0 No other positions
Xwmc398-6B locus 55.6 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xwmc398-6B locus 36.1 () Automated name-based View Maps
Xbarc198-6B locus 59.8 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xbarc198-6B locus 44.1 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6B Xbarc198-6B locus -0.38 () Automated name-based View Maps
Wheat ABD - Wheat_Yr78_2017 - Wheat_Yr78_2017-6B Xbarc198-6B locus 50.9 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xbarc198-6B locus 31.9 () Automated name-based View Maps
BE604119_469-6B locus 60.4 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-6B BE604119_469-6B locus 82.52 (cM) Automated name-based View Maps
Wheat AB - Wheat_AB, Kofa x UC1113 - Wheat_AB, Kofa x UC1113 6B BE604119_469-6B locus 57.2 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6B BE604119_469 locus 42.3 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-6B BE604119_469-6B locus 74.1 () Automated name-based View Maps
Xwg341-6B.1 locus 97.4 No other positions
Xwmc621-6B locus 131.2 No other positions
Xbarc134-6B locus 139 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xbarc134-6B locus 71 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-6B Xbarc134-6B locus 205.2 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xbarc134-6B locus 82.4 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6B Xbarc134-6B locus -1.27 () Automated name-based View Maps
QSev.ucw-6B qtl 115.5 - 139 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.