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Map Set Wheat AB-Durum wheat, Svevo x Ciccio
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - Durum wheat, Svevo x Ciccio [ View Map Set Info ]
Map Name: Svevo/Ciccio-5B
Map Start: 0
Map Stop: 116.9
Features by Type:
9 locus
9 Total

Map Features

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Items 1 to 9 of 9.
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-5B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Centromere-5B locus 47.9 Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-5B Centromere-5B locus 24.7 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-5B Centromere-5B locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-5B Centromere-5B locus 90.6 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5B Centromere-5B locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5B Centromere-5B locus 18.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5B Centromere-5B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-5B Centromere-5B locus 34 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5B Centromere-5B locus 34 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-5B Centromere-5B locus 42.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Centromere-5B locus 35.2 - 39 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-5B Centromere-5B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-5B Centromere-5B locus 8 () Automated name-based View Maps
Xwmc415a locus 65.5 Wheat AB - T. turgidum, Langdon x G18-16 - Tt-LxG-5A Xwmc415a locus 86.7 () Automated name-based View Maps
Xgwm234 locus 0 Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 5B1 Xgwm234 locus 12.9 () Automated name-based View Maps
Wheat AB - T. turgidum, Langdon x G18-16 - Tt-LxG-5B Xgwm234 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5B Xgwm234 locus 21 () Automated name-based View Maps
Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-5B Xgwm234 locus 12.5 () Automated name-based View Maps
Xgwm499 locus 60.5 Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-5B Xgwm499 locus 105.3 () Automated name-based View Maps
Wheat AB - T. turgidum, Langdon x G18-16 - Tt-LxG-5B Xgwm499 locus 66.5 () Automated name-based View Maps
Wheat ABD - Wheat, Finch x Eltan - Wheat, Finch x Eltan 5B.1 Xgwm499 locus 8.6 () Automated name-based View Maps
Wheat ABD - Wheat_Yr79_2018 - Wheat_Yr79_2018-5BS Xgwm499 locus 61.4 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5B Xgwm499 locus 68 () Automated name-based View Maps
Xgwm408 locus 103.2 Wheat AB - T. turgidum, Langdon x G18-16 - Tt-LxG-5B Xgwm408 locus 128.2 () Automated name-based View Maps
Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-5B Xgwm408 locus 160.9 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5B Xgwm408 locus 108 () Automated name-based View Maps
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 5B1 Xgwm408 locus 121.8 () Automated name-based View Maps
Xwmc235 locus 116.9 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5B Xwmc235 locus 113 () Automated name-based View Maps
Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-5B Xwmc235 locus 207.7 () Automated name-based View Maps
CA707573 locus 32.8 No other positions
Xgwm544a locus 44.3 No other positions
Xwmc206a locus 51.6 No other positions

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