*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Consensus-Leymus_2012_TTC2
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Leymus_2012_TTC2_LG4Ns
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Consensus - Leymus_2012_TTC2 [ View Map Set Info ]
Map Name: Leymus_2012_TTC2_LG4Ns
Map Start: 0
Map Stop: 153.77
Features by Type:
45 locus
45 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 45.       of 2 | Next
Consensus - Leymus_2012_TTC2 - Leymus_2012_TTC2_LG4Ns
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
E41M61_272 locus 0 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns E41M61_272 locus 0 () Automated name-based View Maps
Ltc1360 locus 14.57 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns Ltc1360 locus 17.79 () Automated name-based View Maps
E36M59_247 locus 17.51 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns E36M59_247 locus 20.34 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG4Ns E36M59_247 locus 18.79 () Automated name-based View Maps
Ltc0984 locus 19.43 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG6a Ltc0984 locus 152.58 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG6a Ltc0984 locus 153.06 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG4Ns Ltc0984 locus 8.8 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns Ltc0984 locus 13.39 () Automated name-based View Maps
Ltc0570 locus 20.26 Consensus - Leymus_2012_TTC2 - Leymus_2012_TTC2_LG4Xm Ltc0570 locus 29.69 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Xm Ltc0570 locus 23.57 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns Ltc0570 locus 15.44 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG4Ns Ltc0570 locus 12.46 () Automated name-based View Maps
E38M49_390 locus 22.18 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns E38M49_390 locus 22.12 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG4Ns E38M49_390 locus 20.28 () Automated name-based View Maps
TCP1 locus 26.02 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns TCP1 locus 28.5 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG4Ns TCP1 locus 29.65 () Automated name-based View Maps
E36M62_211 locus 33.68 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns E36M62_211 locus 35.04 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG4Ns E36M62_211 locus 34.88 () Automated name-based View Maps
Ltc0218 locus 52.1 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns Ltc0218 locus 57.14 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG4Ns Ltc0218 locus 63.76 () Automated name-based View Maps
Ltc0555 locus 59.2 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns Ltc0555 locus 67 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG4Ns Ltc0555 locus 77.25 () Automated name-based View Maps
Ltc0554 locus 59.29 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns Ltc0554 locus 65.66 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG4Ns Ltc0554 locus 74.24 () Automated name-based View Maps
P33M62 locus 70.91 Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG5Ns P33M62 locus 194.01 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG5Ns P33M62 locus 151.03 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG1a P33M62 locus 22.86 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG3a P33M62 locus 34.48 () Automated name-based View Maps
Consensus - Leymus_2012_TTC2 - Leymus_2012_TTC2_LG5Ns P33M62 locus 164.13 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG7b P33M62 locus 58.51 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG6a P33M62 locus 27.4 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG7b P33M62 locus 58.14 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG3a P33M62 locus 37.75 () Automated name-based View Maps
Consensus - Leymus_2012_TTC2 - Leymus_2012_TTC2_LG6a P33M62 locus 155.62 () Automated name-based View Maps
Consensus - Leymus_2012_TTC2 - Leymus_2012_TTC2_LG1a P33M62 locus 17.85 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG2a P33M62 locus 172.88 () Automated name-based View Maps
Consensus - Leymus_2012_TTC2 - Leymus_2012_TTC2_LG2a P33M62 locus 177.95 () Automated name-based View Maps
Consensus - Leymus_2012_TTC2 - Leymus_2012_TTC2_LG3a P33M62 locus 41.42 () Automated name-based View Maps
Consensus - Leymus_2012_TTC2 - Leymus_2012_TTC2_LG6a P33M62 locus 31.5 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG6a P33M62 locus 154.59 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG2a P33M62 locus 171.36 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns P33M62 locus 154.5 () Automated name-based View Maps
Consensus - Leymus_2012_TTC2 - Leymus_2012_TTC2_LG7b P33M62 locus 60.33 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns P33M62 locus 75.02 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG6a P33M62 locus 29.67 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG4Ns P33M62 locus 80.54 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns P33M62 locus 194.81 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG1a P33M62 locus 21.05 () Automated name-based View Maps
Ltc0536 locus 74.83 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns Ltc0536 locus 83.17 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Xm Ltc0536 locus 60.97 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG4Xm Ltc0536 locus 58.91 () Automated name-based View Maps
E38M60_259 locus 76.54 Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG4Ns E38M60_259 locus 92.32 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns E38M60_259 locus 83.75 () Automated name-based View Maps
E36M61_287 locus 76.78 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns E36M61_287 locus 82.49 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG4Ns E36M61_287 locus 90.22 () Automated name-based View Maps
Ltc1497 locus 77.11 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns Ltc1497 locus 86.84 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG4Ns Ltc1497 locus 95.96 () Automated name-based View Maps
Ltc0516 locus 77.11 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns Ltc0516 locus 85.93 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG4Ns Ltc0516 locus 97.36 () Automated name-based View Maps
Ltc1507 locus 77.56 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns Ltc1507 locus 85.67 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG4Ns Ltc1507 locus 96.88 () Automated name-based View Maps
Ltc0511 locus 77.56 Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG4Ns Ltc0511 locus 97.26 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns Ltc0511 locus 85.74 () Automated name-based View Maps
Ltc0558 locus 77.56 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns Ltc0558 locus 85.2 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Xm Ltc0558 locus 63.61 () Automated name-based View Maps
Consensus - Leymus_2012_TTC2 - Leymus_2012_TTC2_LG4Xm Ltc0558 locus 67.46 () Automated name-based View Maps
Ltc0140 locus 78.11 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns Ltc0140 locus 85.06 () Automated name-based View Maps
Ltc1445 locus 79.95 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns Ltc1445 locus 87.69 () Automated name-based View Maps
Ltc0480 locus 88.35 Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG4Xm Ltc0480 locus 62.95 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Xm Ltc0480 locus 65.52 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns Ltc0480 locus 97.75 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG4Ns Ltc0480 locus 109.51 () Automated name-based View Maps
E41M62_393 locus 96.93 Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG4Ns E41M62_393 locus 120.47 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns E41M62_393 locus 107.72 () Automated name-based View Maps
Ltc0472 locus 99.14 Consensus - Leymus_2012_TTC2 - Leymus_2012_TTC2_LG4Xm Ltc0472 locus 78.67 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Ns Ltc0472 locus 106.43 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Xm Ltc0472 locus 75.44 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.