*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Consensus-Leymus_2012_TTC2
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Leymus_2012_TTC2_LG5Ns
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Consensus - Leymus_2012_TTC2 [ View Map Set Info ]
Map Name: Leymus_2012_TTC2_LG5Ns
Map Start: 0
Map Stop: 192.7
Features by Type:
46 locus
46 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 46.       of 2 | Next
Consensus - Leymus_2012_TTC2 - Leymus_2012_TTC2_LG5Ns
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
E37M62_172 locus 0 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns E37M62_172 locus 3.92 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG5Ns E37M62_172 locus 4.85 () Automated name-based View Maps
Ltc1570 locus 6.32 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns Ltc1570 locus 0 () Automated name-based View Maps
E38M60_248 locus 21.36 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns E38M60_248 locus 17.79 () Automated name-based View Maps
Ltc0925 locus 24.77 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns Ltc0925 locus 21.08 () Automated name-based View Maps
E38M60_094 locus 33.37 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns E38M60_094 locus 27.99 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG5Ns E38M60_094 locus 18.37 () Automated name-based View Maps
Ltc1564 locus 38.34 Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG5Ns Ltc1564 locus 27.58 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns Ltc1564 locus 35.24 () Automated name-based View Maps
Ltc1562 locus 38.9 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns Ltc1562 locus 34.14 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG5Ns Ltc1562 locus 25.87 () Automated name-based View Maps
Consensus - Leymus_2012_TTC2 - Leymus_2012_TTC2_LG5Xm Ltc1562 locus 21.26 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Xm Ltc1562 locus 20.3 () Automated name-based View Maps
E37M47_133 locus 47.55 Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG5Ns E37M47_133 locus 31.9 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns E37M47_133 locus 42.33 () Automated name-based View Maps
E36M48_180 locus 54.1 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns E36M48_180 locus 52.07 () Automated name-based View Maps
Ltc1450 locus 56.99 Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG5Ns Ltc1450 locus 46.24 () Automated name-based View Maps
Consensus - Leymus_2012_TTC2 - Leymus_2012_TTC2_LG5Xm Ltc1450 locus 35.78 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG5Xm Ltc1450 locus 31.3 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns Ltc1450 locus 54.24 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Xm Ltc1450 locus 34.2 () Automated name-based View Maps
Ltc1523 locus 58.51 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns Ltc1523 locus 56.3 () Automated name-based View Maps
Ltc0275 locus 58.71 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG1b Ltc0275 locus 103.56 () Automated name-based View Maps
Consensus - Leymus_2012_TTC2 - Leymus_2012_TTC2_LG1b Ltc0275 locus 100.92 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns Ltc0275 locus 53 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG5Ns Ltc0275 locus 43.98 () Automated name-based View Maps
Ltc1278 locus 60.84 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Xm Ltc1278 locus 39.25 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns Ltc1278 locus 59.54 () Automated name-based View Maps
Consensus - Leymus_2012_TTC2 - Leymus_2012_TTC2_LG5Xm Ltc1278 locus 41.07 () Automated name-based View Maps
Ltc1276 locus 62.01 Consensus - Leymus_2012_TTC2 - Leymus_2012_TTC2_LG5Xm Ltc1276 locus 41.44 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns Ltc1276 locus 58.09 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Xm Ltc1276 locus 39.61 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG5Ns Ltc1276 locus 51.1 () Automated name-based View Maps
CCR-1 locus 63.39 Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG5Ns CCR-1 locus 54.72 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns CCR-1 locus 60.83 () Automated name-based View Maps
E38M60_107 locus 64.13 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns E38M60_107 locus 63.77 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG5Ns E38M60_107 locus 59.78 () Automated name-based View Maps
E36M62_189 locus 72.86 Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG5Ns E36M62_189 locus 86.11 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns E36M62_189 locus 79.56 () Automated name-based View Maps
E41M62_107 locus 80.92 Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG5Ns E41M62_107 locus 93.07 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns E41M62_107 locus 87.52 () Automated name-based View Maps
E41M61_201 locus 85.86 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns E41M61_201 locus 90.86 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG5Ns E41M61_201 locus 95 () Automated name-based View Maps
E41M61_256 locus 88.66 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns E41M61_256 locus 92.28 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG5Ns E41M61_256 locus 95.39 () Automated name-based View Maps
E37M60_105 locus 94.4 Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG5Ns E37M60_105 locus 98.52 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns E37M60_105 locus 96.88 () Automated name-based View Maps
Ltc1313 locus 96.15 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns Ltc1313 locus 99.63 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG5Ns Ltc1313 locus 104.09 () Automated name-based View Maps
Ltc0860 locus 102.3 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns Ltc0860 locus 102.88 () Automated name-based View Maps
Ltc1325 locus 105.11 Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns Ltc1325 locus 105.33 () Automated name-based View Maps
Consensus - Leymus_2012_TTC2 - Leymus_2012_TTC2_LG5Xm Ltc1325 locus 80.94 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG5Xm Ltc1325 locus 66.85 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Xm Ltc1325 locus 74.95 () Automated name-based View Maps
P33M59 locus 107.63 Consensus - Leymus_2012_TTC2 - Leymus_2012_TTC2_LG2b P33M59 locus 115.83 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG2b P33M59 locus 123.14 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG1a P33M59 locus 85.33 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG4Xm P33M59 locus 126.63 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG5Ns P33M59 locus 106.81 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG4Xm P33M59 locus 123.03 () Automated name-based View Maps
Consensus - Leymus_2012_TTC2 - Leymus_2012_TTC2_LG4Xm P33M59 locus 122.11 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG1a P33M59 locus 90.57 () Automated name-based View Maps
Consensus - Leymus_2012_TTC2 - Leymus_2012_TTC2_LG3a P33M59 locus 211.55 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG3a P33M59 locus 200.78 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG2b P33M59 locus 118.62 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG3a P33M59 locus 188.56 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG5Ns P33M59 locus 107.93 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.