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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Maize-Maize, TxCM
(Reference Set)
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Correspondences
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Maps Zea-Ahn-10
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
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Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Maize - Maize, TxCM [ View Map Set Info ]
Map Name: Zea-Ahn-10
Map Start: 0.00
Map Stop: 150.20
Features by Type:
14 locus
14 Total

Map Features

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Items 1 to 14 of 14.
Maize - Maize, TxCM - Zea-Ahn-10
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
BCD1072b locus 53.30 Maize - Maize, TxCM - Zea-Ahn-5 BCD1072b locus 61.00 () Automated name-based View Maps
BNL3.04 locus 0.00 No other positions
RZ141b locus 26.95 No other positions
NPI105 locus 31.75 No other positions
RZ261 locus 33.95 Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-F Xrz261 locus 59.80 () Automated name-based View Maps
Rice - Rice, BxOl - Rice-CU-12 RZ261 locus 43.10 () Automated name-based View Maps
CDO456a locus 41.15 No other positions
NPI269B locus 84.95 No other positions
BNL10.13 locus 101.55 No other positions
UMC44A locus 110.40 No other positions
CDO1417b locus 127.45 No other positions
CDO539a locus 134.65 Oat - Oat, KxO, 2003 - Oat-KxO/2003-2 CDO539a locus 36.10 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-8 CDO539A locus 81.40 () Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_2 CDO539A locus 60.00 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg08 CDO539A locus 81.40 () Automated name-based View Maps
RZ17a locus 143.30 No other positions
RZ590b locus 144.35 No other positions
gln1 locus 150.20 No other positions

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