*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2009-KxO
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-2009-KxO_36
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2009-KxO [ View Map Set Info ]
Map Name: Oat-2009-KxO_36
Map Start: 0 cM
Map Stop: 32 cM
Features by Type:
35 locus
35 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 35 of 35.       Previous | of 2
Oat - Oat-2009-KxO - Oat-2009-KxO_36
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
e1m3_6an locus 20 Oat - Oat, KxO, 2003 - Oat-KxO/2003-36 e1m3_6an locus 10.1 () Automated name-based View Maps
re6m4_1c locus 20 Oat - Oat, KxO, 2003 - Oat-KxO/2003-36 re6m4_1c locus 10.9 () Automated name-based View Maps
opt-0233 locus 20 No other positions
opt-11294 locus 20 No other positions
opt-12382 locus 20 No other positions
AME205 locus 20 Oat - Oat-2016-Consensus - Oat-2016-Consensus-4 AME205 locus 44.7 () Automated name-based View Maps
Oat - Oat-2016-KxO - Oat-2016-KxO_34 AME205 locus 4.7 () Automated name-based View Maps
Oat - Oat-2014-AB_QTL_KxO - Oat-2014-KxO_36 AME205 locus 10 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg04 AME205 locus 44.7 () Automated name-based View Maps
AME003 locus 20 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 AME003 locus 32.5 () Automated name-based View Maps
Oat - Oat-2014-AB_QTL_KxO - Oat-2014-KxO_36 AME003 locus 12 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 AME003 locus 32.5 () Automated name-based View Maps
AM3 locus 20 Oat - Oat-2014-AB_QTL_PopnB - Oat-2014-Oat_popnB_11 AM3 locus 11 (cM) Automated name-based View Maps
Oat - Oat-2014-AB_QTL_PopnA - Oat-2014-Oat_popnA_11 AM3 locus 24 (cM) Automated name-based View Maps
Oat - Oat-2010-MxN_PcQTL - Oat-2010-MxN_26 AM3 locus 10.7 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 AM3 locus 37.1 () Automated name-based View Maps
Oat - Oat, AxM Doubled Haploid, 2008 - Oat-AxM-DH2008-13 AM3 locus 71 () Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-36 AM3 locus 18.7 () Automated name-based View Maps
Oat - Oat, MxN, genetic 2005 - Oat-MxN_2005-26 AM3 locus 12.7 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 AM3 locus 37.1 () Automated name-based View Maps
Oat - Oat-2014-AB_QTL_KxO - Oat-2014-KxO_36 AM3 locus 16 (cM) Automated name-based View Maps
Oat - Oat-2013-MxN-RGA - Oat-2013-MxN-RGA_MN26 am3 locus 10.7 (cM) Automated name-based View Maps
opt-12382_c locus 24 Oat - Oat-2010-MAMA - Oat-2010-MAMA-KO_36 opt-12382_c locus 6 (cM) Automated name-based View Maps
CDO669A locus 32 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-4H CDO669a locus 16.76 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-4H CDO669a locus 15.8 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H CDO669a locus 29.2 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 CDO669A locus 32.3 () Automated name-based View Maps
Oat - Oat-2014-AB_QTL_KxO - Oat-2014-KxO_36 CDO669A locus 27 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 CDO669A locus 32.3 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-4H CDO669a locus 16.76 () Automated name-based View Maps
Oat - Oat-2013-KxO-RGA - RGA-2013_KO36 cdo669a locus 30 (cM) Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-4 CDO669a locus 16.76 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H CDO669a locus 19.75 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-4H CDO669a locus 16.19 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-4H CDO669a locus 107.2 () Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-36 CDO669a locus 29.7 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.