*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link

**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2013-SNP-PxG
(Reference Set)
Align Vertically
Maps Oat-2013-SNP-PxG-3
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Always Display
Show Labels: None Landmarks All
Collapse Overlapping
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Greater Than
Automated name-based
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Number of
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2013-SNP-PxG [ View Map Set Info ]
Map Name: Oat-2013-SNP-PxG-3
Map Start: 6.40
Map Stop: 71.40
Features by Type:
11 locus
11 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 11 of 11.
Oat - Oat-2013-SNP-PxG - Oat-2013-SNP-PxG-3
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
GMI_ES02_c631 locus 6.40 Oat - Oat-2013-SNP-OxP - Oat-2013-SNP-OxP-6 GMI_ES02_c631 locus 43.70 () Automated name-based View Maps
Oat - Oat-2013-SNP-OxT - Oat-2013-SNP-OxT-2 GMI_ES02_c631 locus 22.80 () Automated name-based View Maps
Oat - Avena_2013_SNP - Avena_2013_SNP_19A GMI_ES02_c631 locus 104.23 () Automated name-based View Maps
Oat - Oat-2013-SNP-HxZ - Oat-2013-SNP-HxZ-5 GMI_ES02_c631 locus 2.13 () Automated name-based View Maps
Oat - Oat-2013-SNP-SxH - Oat-2013-SNP-SxH-10 GMI_ES02_c631 locus 1.90 () Automated name-based View Maps
GMI_ES_CC13153 locus 6.40 No other positions
GMI_ES17_c8066 locus 10.30 Oat - Avena_2013_SNP - Avena_2013_SNP_19A GMI_ES17_c8066 locus 99.63 () Automated name-based View Maps
Oat - Oat-2013-SNP-OxP - Oat-2013-SNP-OxP-6 GMI_ES17_c8066 locus 28.80 () Automated name-based View Maps
GMI_ES02_c6784 locus 35.70 Oat - Avena_2013_SNP - Avena_2013_SNP_19A GMI_ES02_c6784 locus 73.49 () Automated name-based View Maps
GMI_ES15_c15790 locus 40.20 Oat - Avena_2013_SNP - Avena_2013_SNP_19A GMI_ES15_c15790 locus 69.76 () Automated name-based View Maps
GMI_ES15_c8191 locus 57.30 Oat - Avena_2013_SNP - Avena_2013_SNP_19A GMI_ES15_c8191 locus 53.94 () Automated name-based View Maps
Oat - Oat-2013-SNP-OxP - Oat-2013-SNP-OxP-6 GMI_ES15_c8191 locus 3.70 () Automated name-based View Maps
GMI_ES02_c7768 locus 63.00 Oat - Avena_2013_SNP - Avena_2013_SNP_19A GMI_ES02_c7768 locus 49.54 () Automated name-based View Maps
GMI_DS_CC10481 locus 63.00 Oat - Avena_2013_SNP - Avena_2013_SNP_19A GMI_DS_CC10481 locus 49.36 () Automated name-based View Maps
Oat - Oat-2013-SNP-KxO - Oat-2013-SNP-KxO-1 GMI_DS_CC10481 locus 93.50 () Automated name-based View Maps
GMI_ES17_c19385 locus 65.20 Oat - Avena_2013_SNP - Avena_2013_SNP_19A GMI_ES17_c19385 locus 46.71 () Automated name-based View Maps
Oat - Oat-2013-SNP-OxP - Oat-2013-SNP-OxP-5 GMI_ES17_c19385 locus 81.50 () Automated name-based View Maps
GMI_ES01_lrc12590 locus 67.40 Oat - Oat-2013-SNP-KxO - Oat-2013-SNP-KxO-1 GMI_ES01_lrc12590 locus 108.60 () Automated name-based View Maps
Oat - Avena_2013_SNP - Avena_2013_SNP_19A GMI_ES01_lrc12590 locus 43.69 () Automated name-based View Maps
GMI_ES15_c6155 locus 71.40 Oat - Oat-2013-SNP-OxT - Oat-2013-SNP-OxT-3 GMI_ES15_c6155 locus 99.90 () Automated name-based View Maps
Oat - Avena_2013_SNP - Avena_2013_SNP_19A GMI_ES15_c6155 locus 39.74 () Automated name-based View Maps
Oat - Oat-2013-SNP-KxO - Oat-2013-SNP-KxO-8 GMI_ES15_c6155 locus 14.70 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.