*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2016-BxG
(Reference Set)
Oat-Oat-2016-PxG
Min.
Correspondences
Align Vertically
Stack
Maps Oat-2016-BxG_13 Oat-2016-PxG_14
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2016-BxG [ View Map Set Info ]
Map Name: Oat-2016-BxG_13
Map Start: 0.00
Map Stop: 67.20
Features by Type:
34 locus
34 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 34 of 34.       Previous | of 2
Oat - Oat-2016-BxG - Oat-2016-BxG_13
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
GMI_ES15_c2423_507 locus 37.70 Oat - Oat-2016-Consensus - Oat-2016-Consensus-18 GMI_ES15_c2423_507 locus 35.20 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg18 GMI_ES15_c2423_507 locus 35.20 () Automated name-based View Maps
Oat - Oat-2016-PxB - Oat-2016-PxB_4 GMI_ES15_c2423_507 locus 31.10 () Automated name-based View Maps
Oat - Oat-2017-UTauxU017 - Oat-2017-UTauxU017-29 GMI_ES15_c2423_507 locus 0.00 (cM) Automated name-based View Maps
GMI_ES02_c4957_300 locus 37.70 Oat - Oat-2016-IL5 - Oat-2016-IL5_SS12 GMI_ES02_c4957_300 locus 44.30 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-18 GMI_ES02_c4957_300 locus 34.40 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_8 GMI_ES02_c4957_300 locus 25.10 () Automated name-based View Maps
Oat - Oat-2016-IL4 - Oat-2016-IL4_1a GMI_ES02_c4957_300 locus 37.80 () Automated name-based View Maps
Oat - Avena_2013_SNP - Avena_2013_SNP_7C-17A GMI_ES02_c4957 locus 65.40 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg18 GMI_ES02_c4957_300 locus 34.40 () Automated name-based View Maps
GMI_ES17_c13090_302 locus 37.70 Oat - Oat-2017-UTauxU017 - Oat-2017-UTauxU017-29 GMI_ES17_c13090_302 locus 1.19 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-18 GMI_ES17_c13090_302 locus 34.40 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg18 GMI_ES17_c13090_302 locus 34.40 () Automated name-based View Maps
Oat - Oat-2016-IL5 - Oat-2016-IL5_SS12 GMI_ES17_c13090_302 locus 44.30 () Automated name-based View Maps
Oat - Oat-2016-IL4 - Oat-2016-IL4_1a GMI_ES17_c13090_302 locus 37.80 () Automated name-based View Maps
GMI_ES01_c6310_584 locus 49.80 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg18 GMI_ES01_c6310_584 locus 29.50 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-18 GMI_ES01_c6310_584 locus 29.50 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_14 GMI_ES01_c6310_584 locus 36.90 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_8 GMI_ES01_c6310_584 locus 35.80 () Automated name-based View Maps
GMI_ES01_c6310_383 locus 49.80 Oat - Oat-2016-OxT - Oat-2016-OxT_8 GMI_ES01_c6310_383 locus 35.80 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg18 GMI_ES01_c6310_383 locus 27.70 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_14 GMI_ES01_c6310_383 locus 34.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-18 GMI_ES01_c6310_383 locus 27.70 () Automated name-based View Maps
GMI_ES17_c3673_666 locus 52.50 Oat - Oat-2016-OxP - Oat-2016-OxP_19 GMI_ES17_c3673_666 locus 15.40 () Automated name-based View Maps
Oat - Oat-2016-PxB - Oat-2016-PxB_4 GMI_ES17_c3673_666 locus 16.10 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg18 GMI_ES17_c3673_666 locus 24.40 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-18 GMI_ES17_c3673_666 locus 24.40 () Automated name-based View Maps
GMI_ES15_lrc19156_98 locus 56.60 Oat - Oat-2016-PxB - Oat-2016-PxB_4 GMI_ES15_lrc19156_98 locus 15.00 () Automated name-based View Maps
Oat - Oat-2016-OxP - Oat-2016-OxP_19 GMI_ES15_lrc19156_98 locus 13.10 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg18 GMI_ES15_lrc19156_98 locus 23.10 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-18 GMI_ES15_lrc19156_98 locus 23.10 () Automated name-based View Maps
GMI_GBS_102158 locus 60.50 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg18 GMI_GBS_102158 locus 21.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-18 GMI_GBS_102158 locus 21.70 () Automated name-based View Maps
GMI_ES15_c19177_191 locus 67.20 Oat - Oat-2016-DxE - Oat-2016-DxE_6 GMI_ES15_c19177_191 locus 28.40 () Automated name-based View Maps
Oat - Oat-2016-AxM - Oat-2016-AxM_3 GMI_ES15_c19177_191 locus 18.10 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg18 GMI_ES15_c19177_191 locus 18.50 () Automated name-based View Maps
Oat - Oat-2016-IL4 - Oat-2016-IL4_1a GMI_ES15_c19177_191 locus 23.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-18 GMI_ES15_c19177_191 locus 18.50 () Automated name-based View Maps
Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_8 GMI_ES15_c19177_191 locus 16.85 (cM) Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.