*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2016-BxG
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-2016-BxG_4b
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)




Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2016-BxG [ View Map Set Info ]
Map Name: Oat-2016-BxG_4b
Map Start: 0.00
Map Stop: 50.30
Features by Type:
25 locus
25 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 25.
Oat - Oat-2016-BxG - Oat-2016-BxG_4b
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
GMI_ES05_c5613_127 locus 0.00 Oat - Oat-2016-PxB - Oat-2016-PxB_26 GMI_ES05_c5613_127 locus 0.00 () Automated name-based View Maps
Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_10 GMI_ES05_c5613_127 locus 89.31 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 GMI_ES05_c5613_127 locus 0.00 () Automated name-based View Maps
Oat - Oat-2016-IL4 - Oat-2016-IL4_21 GMI_ES05_c5613_127 locus 11.00 () Automated name-based View Maps
Oat - Oat-2017-UTauxU017 - Oat-2017-UTauxU017-10 GMI_ES05_c5613_127 locus 0.91 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 GMI_ES05_c5613_127 locus 0.00 () Automated name-based View Maps
GMI_ES03_c649_134 locus 2.20 Oat - Oat-2016-DxE - Oat-2016-DxE_7 GMI_ES03_c649_134 locus 41.00 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 GMI_ES03_c649_134 locus 2.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 GMI_ES03_c649_134 locus 2.70 () Automated name-based View Maps
Oat - Oat-2016-OxP - Oat-2016-OxP_20 GMI_ES03_c649_134 locus 2.60 () Automated name-based View Maps
GMI_ES14_c53_424 locus 4.40 Oat - Oat-2016-HxZ - Oat-2016-HxZ_SW15 GMI_ES14_c53_424 locus 14.80 () Automated name-based View Maps
Oat - Oat-2016-PxB - Oat-2016-PxB_26 GMI_ES14_c53_424 locus 2.20 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 GMI_ES14_c53_424 locus 4.50 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 GMI_ES14_c53_424 locus 4.50 () Automated name-based View Maps
Oat - Oat-2016-IL5 - Oat-2016-IL5_SS4 GMI_ES14_c53_424 locus 4.10 () Automated name-based View Maps
Oat - Oat-2017-UTauxU017 - Oat-2017-UTauxU017-10 GMI_ES14_c53_424 locus 9.56 (cM) Automated name-based View Maps
GMI_ES02_c14254_241 locus 9.80 Oat - Oat-2016-IL5 - Oat-2016-IL5_SS4 GMI_ES02_c14254_241 locus 21.20 () Automated name-based View Maps
Oat - Oat-2016-KxO - Oat-2016-KxO_15 GMI_ES02_c14254_241 locus 15.30 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_27b GMI_ES02_c14254_241 locus 13.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 GMI_ES02_c14254_241 locus 19.00 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 GMI_ES02_c14254_241 locus 19.00 () Automated name-based View Maps
GMI_ES14_c9429_338 locus 9.80 Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES14_c9429_338 locus 35.10 () Automated name-based View Maps
Oat - Oat-2016-AxM - Oat-2016-AxM_13 GMI_ES14_c9429_338 locus 5.40 () Automated name-based View Maps
Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_16 GMI_ES14_c9429_338 locus 5.12 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg12 GMI_ES14_c9429_338 locus 35.10 () Automated name-based View Maps
GMI_GBS_16992 locus 15.90 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 GMI_GBS_16992 locus 26.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 GMI_GBS_16992 locus 26.00 () Automated name-based View Maps
Oat - Oat-2016-OxP - Oat-2016-OxP_20 GMI_GBS_16992 locus 22.80 () Automated name-based View Maps
Oat - Oat-2016-PxB - Oat-2016-PxB_26 GMI_GBS_16992 locus 13.00 () Automated name-based View Maps
GMI_GBS_70344 locus 19.50 Oat - Oat-2016-PxB - Oat-2016-PxB_26 GMI_GBS_70344 locus 17.30 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 GMI_GBS_70344 locus 29.10 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 GMI_GBS_70344 locus 29.10 () Automated name-based View Maps
GMI_ES01_c8165_708 locus 25.50 Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 GMI_ES01_c8165_708 locus 34.10 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 GMI_ES01_c8165_708 locus 34.10 () Automated name-based View Maps
Oat - Oat-2016-AxM - Oat-2016-AxM_5a GMI_ES01_c8165_708 locus 20.20 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_12a GMI_ES01_c8165_708 locus 6.90 () Automated name-based View Maps
Oat - Oat-2016-PxB - Oat-2016-PxB_26 GMI_ES01_c8165_708 locus 24.00 () Automated name-based View Maps
Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_10 GMI_ES01_c8165_708 locus 68.12 (cM) Automated name-based View Maps
GMI_ES14_c10602_498 locus 43.60 Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 GMI_ES14_c10602_498 locus 67.40 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_27a GMI_ES14_c10602_498 locus 23.60 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 GMI_ES14_c10602_498 locus 67.40 () Automated name-based View Maps
GMI_ES15_c19272_135 locus 43.60 Oat - Oat-2016-AxM - Oat-2016-AxM_15 GMI_ES15_c19272_135 locus 0.00 () Automated name-based View Maps
Oat - Oat-2016-DxE - Oat-2016-DxE_7 GMI_ES15_c19272_135 locus 0.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 GMI_ES15_c19272_135 locus 72.70 () Automated name-based View Maps
Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_19 GMI_ES15_c19272_135 locus 0.32 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 GMI_ES15_c19272_135 locus 72.70 () Automated name-based View Maps
GMI_ES15_c6098_227 locus 43.60 Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 GMI_ES15_c6098_227 locus 87.30 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_27a GMI_ES15_c6098_227 locus 23.60 () Automated name-based View Maps
Oat - Oat-2016-DxE - Oat-2016-DxE_7 GMI_ES15_c6098_227 locus 0.00 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 GMI_ES15_c6098_227 locus 87.30 () Automated name-based View Maps
GMI_ES22_c8130_418 locus 43.60 Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 GMI_ES22_c8130_418 locus 87.30 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 GMI_ES22_c8130_418 locus 87.30 () Automated name-based View Maps
Oat - Oat-2017-U01BxU006 - Oat-2017-U01BxU006-1 GMI_ES22_c8130_418 locus 26.07 (cM) Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_27a GMI_ES22_c8130_418 locus 23.60 () Automated name-based View Maps
GMI_GBS_3571 locus 43.60 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg33 GMI_GBS_3571 locus 102.60 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_5 GMI_GBS_3571 locus 7.10 () Automated name-based View Maps
Oat - Oat-2017-U01BxU006 - Oat-2017-U01BxU006-1 GMI_GBS_3571 locus 84.75 (cM) Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_27a GMI_GBS_3571 locus 23.60 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-33 GMI_GBS_3571 locus 102.60 () Automated name-based View Maps
GMI_ES17_c2286_285 locus 43.60 Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 GMI_ES17_c2286_285 locus 87.30 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 GMI_ES17_c2286_285 locus 87.30 () Automated name-based View Maps
GMI_ES_LB_9789 locus 43.60 Oat - Oat-2016-KxO - Oat-2016-KxO_15 GMI_ES_LB_9789 locus 38.10 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_27a GMI_ES_LB_9789 locus 23.60 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 GMI_ES_LB_9789 locus 60.40 () Automated name-based View Maps
Oat - Oat-2016-AxM - Oat-2016-AxM_5a GMI_ES_LB_9789 locus 54.40 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 GMI_ES_LB_9789 locus 60.40 () Automated name-based View Maps
Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_10 GMI_ES_LB_9789 locus 33.60 (cM) Automated name-based View Maps
GMI_ES05_c14633_290 locus 43.60 Oat - Oat-2017-U01BxU006 - Oat-2017-U01BxU006-1 GMI_ES05_c14633_290 locus 84.22 (cM) Automated name-based View Maps
Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_10 GMI_ES05_c14633_290 locus 33.60 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 GMI_ES05_c14633_290 locus 72.70 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_27a GMI_ES05_c14633_290 locus 23.60 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 GMI_ES05_c14633_290 locus 72.70 () Automated name-based View Maps
Oat - Oat-2016-DxE - Oat-2016-DxE_7 GMI_ES05_c14633_290 locus 0.00 () Automated name-based View Maps
GMI_ES03_c3844_572 locus 43.60 Oat - Oat-2017-U01BxU006 - Oat-2017-U01BxU006-1 GMI_ES03_c3844_572 locus 46.41 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 GMI_ES03_c3844_572 locus 61.00 () Automated name-based View Maps
Oat - Oat-2016-AxM - Oat-2016-AxM_5a GMI_ES03_c3844_572 locus 55.00 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_27a GMI_ES03_c3844_572 locus 23.60 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 GMI_ES03_c3844_572 locus 61.00 () Automated name-based View Maps
Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_10 GMI_ES03_c3844_572 locus 33.28 (cM) Automated name-based View Maps
Oat - Oat-2016-DxE - Oat-2016-DxE_7 GMI_ES03_c3844_572 locus 0.90 () Automated name-based View Maps
GMI_ES03_c13331_202 locus 43.60 Oat - Oat-2016-IL4 - Oat-2016-IL4_9 GMI_ES03_c13331_202 locus 25.60 () Automated name-based View Maps
Oat - Oat-2017-U01BxU006 - Oat-2017-U01BxU006-1 GMI_ES03_c13331_202 locus 84.10 (cM) Automated name-based View Maps
Oat - Oat-2016-HxZ - Oat-2016-HxZ_ksh1 GMI_ES03_c13331_202 locus 5.50 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 GMI_ES03_c13331_202 locus 61.00 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 GMI_ES03_c13331_202 locus 61.00 () Automated name-based View Maps
GMI_ES03_c11951_222 locus 43.60 Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_10 GMI_ES03_c11951_222 locus 33.60 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 GMI_ES03_c11951_222 locus 60.40 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 GMI_ES03_c11951_222 locus 60.40 () Automated name-based View Maps
Oat - Oat-2016-AxM - Oat-2016-AxM_5a GMI_ES03_c11951_222 locus 54.40 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_27a GMI_ES03_c11951_222 locus 23.60 () Automated name-based View Maps
GMI_ES02_c16953_600 locus 43.60 Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 GMI_ES02_c16953_600 locus 85.20 () Automated name-based View Maps
Oat - Oat-2016-KxO - Oat-2016-KxO_15 GMI_ES02_c16953_600 locus 38.10 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 GMI_ES02_c16953_600 locus 85.20 () Automated name-based View Maps
GMI_ES02_c1532_592 locus 43.60 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 GMI_ES02_c1532_592 locus 72.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 GMI_ES02_c1532_592 locus 72.70 () Automated name-based View Maps
GMI_ES02_c12285_761 locus 43.60 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 GMI_ES02_c12285_761 locus 72.70 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_27a GMI_ES02_c12285_761 locus 23.60 () Automated name-based View Maps
Oat - Oat-2017-U01BxU006 - Oat-2017-U01BxU006-1 GMI_ES02_c12285_761 locus 50.49 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 GMI_ES02_c12285_761 locus 72.70 () Automated name-based View Maps
GMI_ES05_c22428_236 locus 43.60 Oat - Oat-2017-U01BxU006 - Oat-2017-U01BxU006-6 GMI_ES05_c22428_236 locus 25.74 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 GMI_ES05_c22428_236 locus 61.00 () Automated name-based View Maps
Oat - Oat-2017-UTauxU017 - Oat-2017-UTauxU017-2 GMI_ES05_c22428_236 locus 52.93 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 GMI_ES05_c22428_236 locus 61.00 () Automated name-based View Maps
GMI_GBS_32754 locus 50.30 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 GMI_GBS_32754 locus 51.30 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_27a GMI_GBS_32754 locus 19.00 () Automated name-based View Maps
Oat - Oat-2016-HxZ - Oat-2016-HxZ_SW10 GMI_GBS_32754 locus 22.10 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 GMI_GBS_32754 locus 51.30 () Automated name-based View Maps
GMI_ES03_c9160_146 locus 50.30 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 GMI_ES03_c9160_146 locus 85.20 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 GMI_ES03_c9160_146 locus 85.20 () Automated name-based View Maps
Oat - Oat-2016-KxO - Oat-2016-KxO_15 GMI_ES03_c9160_146 locus 38.10 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_27a GMI_ES03_c9160_146 locus 19.00 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.