*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2016-HxZ
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-2016-HxZ_ss4
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2016-HxZ [ View Map Set Info ]
Map Name: Oat-2016-HxZ_ss4
Map Start: 0
Map Stop: 90.1
Features by Type:
75 locus
75 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 75.       Previous | of 3 | Next
Oat - Oat-2016-HxZ - Oat-2016-HxZ_ss4
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
GMI_ES_LB_4286 locus 40.2 Oat - Oat-2016-PxB - Oat-2016-PxB_22 GMI_ES_LB_4286 locus 26 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 GMI_ES_LB_4286 locus 56.5 () Automated name-based View Maps
Oat - Oat-2016-BxG - Oat-2016-BxG_1a GMI_ES_LB_4286 locus 22.9 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 GMI_ES_LB_4286 locus 56.5 () Automated name-based View Maps
Oat - Oat-2017-U01BxU006 - Oat-2017-U01BxU006-9 GMI_ES_LB_4286 locus 40.54 (cM) Automated name-based View Maps
GMI_DS_CC4575_55 locus 40.2 Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 GMI_DS_CC4575_55 locus 56.5 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 GMI_DS_CC4575_55 locus 56.5 () Automated name-based View Maps
Oat - Avena_2013_SNP - Avena_2013_SNP_16A GMI_DS_CC4575 locus 56.5 () Automated name-based View Maps
GMI_ES17_c4475_475 locus 40.2 Oat - Avena_2013_SNP - Avena_2013_SNP_16A GMI_ES17_c4475 locus 56.38 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 GMI_ES17_c4475_475 locus 56.5 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 GMI_ES17_c4475_475 locus 56.5 () Automated name-based View Maps
GMI_ES17_c9625_419 locus 40.2 Oat - Avena_2013_SNP - Avena_2013_SNP_16A GMI_ES17_c9625 locus 56.52 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_3 GMI_ES17_c9625_419 locus 68.9 () Automated name-based View Maps
Oat - Oat-2016-IL5 - Oat-2016-IL5_SS13 GMI_ES17_c9625_419 locus 53.3 () Automated name-based View Maps
Oat - Oat-2017-U01BxU006 - Oat-2017-U01BxU006-9 GMI_ES17_c9625_419 locus 39.11 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 GMI_ES17_c9625_419 locus 56.5 () Automated name-based View Maps
Oat - Oat-2016-BxG - Oat-2016-BxG_1a GMI_ES17_c9625_419 locus 22.9 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 GMI_ES17_c9625_419 locus 56.5 () Automated name-based View Maps
GMI_ES17_c5367_259 locus 40.2 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 GMI_ES17_c5367_259 locus 56.5 () Automated name-based View Maps
Oat - Avena_2013_SNP - Avena_2013_SNP_16A GMI_ES17_c5367 locus 56.23 () Automated name-based View Maps
Oat - Oat-2016-IL5 - Oat-2016-IL5_SS13 GMI_ES17_c5367_259 locus 53.3 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 GMI_ES17_c5367_259 locus 56.5 () Automated name-based View Maps
avgbs_216035 locus 40.2 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 avgbs_216035 locus 56.5 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 avgbs_216035 locus 56.5 () Automated name-based View Maps
GMI_ES17_c1086_770 locus 40.2 Oat - Avena_2013_SNP - Avena_2013_SNP_16A GMI_ES17_c1086 locus 56.55 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_3 GMI_ES17_c1086_770 locus 68.9 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 GMI_ES17_c1086_770 locus 56.5 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 GMI_ES17_c1086_770 locus 56.5 () Automated name-based View Maps
GMI_ES_CC13348_93 locus 43.6 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 GMI_ES_CC13348_93 locus 57 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 GMI_ES_CC13348_93 locus 57 () Automated name-based View Maps
Oat - Avena_2013_SNP - Avena_2013_SNP_16A GMI_ES_CC13348 locus 53.64 () Automated name-based View Maps
GMI_ES17_c2787_171 locus 51 Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 GMI_ES17_c2787_171 locus 68.5 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 GMI_ES17_c2787_171 locus 68.5 () Automated name-based View Maps
Oat - Oat-2017-U01BxU006 - Oat-2017-U01BxU006-9 GMI_ES17_c2787_171 locus 28.23 (cM) Automated name-based View Maps
Oat - Oat-2016-BxG - Oat-2016-BxG_1a GMI_ES17_c2787_171 locus 19.2 () Automated name-based View Maps
Oat - Oat-2016-AxM - Oat-2016-AxM_28b GMI_ES17_c2787_171 locus 8.6 () Automated name-based View Maps
Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_39 GMI_ES17_c2787_171 locus 10.12 (cM) Automated name-based View Maps
GMI_ES02_c17401_928 locus 51 Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_39 GMI_ES02_c17401_928 locus 9.8 (cM) Automated name-based View Maps
Oat - Oat-2016-AxM - Oat-2016-AxM_28b GMI_ES02_c17401_928 locus 8.3 () Automated name-based View Maps
Oat - Oat-2016-KxO - Oat-2016-KxO_9 GMI_ES02_c17401_928 locus 56.9 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_6a GMI_ES02_c17401_928 locus 53.9 () Automated name-based View Maps
Oat - Oat-2016-BxG - Oat-2016-BxG_1a GMI_ES02_c17401_928 locus 19.2 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 GMI_ES02_c17401_928 locus 63.2 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 GMI_ES02_c17401_928 locus 63.2 () Automated name-based View Maps
GMI_ES17_c1612_641 locus 51 Oat - Oat-2016-PxG - Oat-2016-PxG_6a GMI_ES17_c1612_641 locus 53.9 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 GMI_ES17_c1612_641 locus 63.2 () Automated name-based View Maps
Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_39 GMI_ES17_c1612_641 locus 9.8 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 GMI_ES17_c1612_641 locus 63.2 () Automated name-based View Maps
Oat - Avena_2013_SNP - Avena_2013_SNP_16A GMI_ES17_c1612 locus 61.75 () Automated name-based View Maps
Oat - Oat-2016-BxG - Oat-2016-BxG_1a GMI_ES17_c1612_641 locus 19.2 () Automated name-based View Maps
Oat - Oat-2016-AxM - Oat-2016-AxM_28b GMI_ES17_c1612_641 locus 8.3 () Automated name-based View Maps
GMI_ES14_c14823_110 locus 51 Oat - Oat-2016-BxG - Oat-2016-BxG_1a GMI_ES14_c14823_110 locus 19.2 () Automated name-based View Maps
Oat - Oat-2016-AxM - Oat-2016-AxM_28b GMI_ES14_c14823_110 locus 8.6 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 GMI_ES14_c14823_110 locus 68.5 () Automated name-based View Maps
Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_39 GMI_ES14_c14823_110 locus 10.12 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 GMI_ES14_c14823_110 locus 68.5 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_6a GMI_ES14_c14823_110 locus 53.9 () Automated name-based View Maps
avgbs_204191 locus 57.1 Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 avgbs_204191 locus 80.8 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 avgbs_204191 locus 80.8 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_3 avgbs_204191 locus 86.9 () Automated name-based View Maps
GMI_ES17_c2063_243 locus 63.2 Oat - Oat-2016-OxT - Oat-2016-OxT_3 GMI_ES17_c2063_243 locus 134.6 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 GMI_ES17_c2063_243 locus 114.7 () Automated name-based View Maps
Oat - Avena_2013_SNP - Avena_2013_SNP_16A GMI_ES17_c2063 locus 81.62 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 GMI_ES17_c2063_243 locus 114.7 () Automated name-based View Maps
Oat - Oat-2016-KxO - Oat-2016-KxO_22 GMI_ES17_c2063_243 locus 22.4 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_6a GMI_ES17_c2063_243 locus 78.5 () Automated name-based View Maps
GMI_GBS_80856 locus 63.2 Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_39 GMI_GBS_80856 locus 36.07 (cM) Automated name-based View Maps
Oat - Oat-2016-AxM - Oat-2016-AxM_28b GMI_GBS_80856 locus 34.4 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 GMI_GBS_80856 locus 111.3 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_3 GMI_GBS_80856 locus 131.6 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 GMI_GBS_80856 locus 111.3 () Automated name-based View Maps
Oat - Oat-2016-IL5 - Oat-2016-IL5_SS13 GMI_GBS_80856 locus 28.1 () Automated name-based View Maps
GMI_ES15_c14992_307 locus 63.2 Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_39 GMI_ES15_c14992_307 locus 36.07 (cM) Automated name-based View Maps
Oat - Oat-2016-AxM - Oat-2016-AxM_28b GMI_ES15_c14992_307 locus 34.4 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_3 GMI_ES15_c14992_307 locus 131.6 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 GMI_ES15_c14992_307 locus 111.3 () Automated name-based View Maps
Oat - Oat-2016-IL5 - Oat-2016-IL5_SS13 GMI_ES15_c14992_307 locus 28.1 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 GMI_ES15_c14992_307 locus 111.3 () Automated name-based View Maps
GMI_ES15_c730_237 locus 63.2 Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 GMI_ES15_c730_237 locus 114.7 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 GMI_ES15_c730_237 locus 114.7 () Automated name-based View Maps
Oat - Oat-2016-KxO - Oat-2016-KxO_22 GMI_ES15_c730_237 locus 22.4 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_3 GMI_ES15_c730_237 locus 134.6 () Automated name-based View Maps
GMI_ES17_c4241_356 locus 63.2 Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 GMI_ES17_c4241_356 locus 114.7 () Automated name-based View Maps
Oat - Avena_2013_SNP - Avena_2013_SNP_16A GMI_ES17_c4241 locus 80.78 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 GMI_ES17_c4241_356 locus 114.7 () Automated name-based View Maps
GMI_ES15_c6120_507 locus 63.2 Oat - Oat-2016-PxG - Oat-2016-PxG_6a GMI_ES15_c6120_507 locus 78.5 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 GMI_ES15_c6120_507 locus 114.7 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_3 GMI_ES15_c6120_507 locus 134.6 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 GMI_ES15_c6120_507 locus 114.7 () Automated name-based View Maps
GMI_ES14_lrc18713_286 locus 63.2 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 GMI_ES14_lrc18713_286 locus 117.4 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 GMI_ES14_lrc18713_286 locus 117.4 () Automated name-based View Maps
Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_39 GMI_ES14_lrc18713_286 locus 39.72 (cM) Automated name-based View Maps
Oat - Oat-2016-AxM - Oat-2016-AxM_28b GMI_ES14_lrc18713_286 locus 38.1 () Automated name-based View Maps
Oat - Oat-2016-IL5 - Oat-2016-IL5_SS13 GMI_ES14_lrc18713_286 locus 27.5 () Automated name-based View Maps
GMI_ES17_lrc7334_312 locus 63.2 Oat - Avena_2013_SNP - Avena_2013_SNP_16A GMI_ES17_lrc7334 locus 80.78 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 GMI_ES17_lrc7334_312 locus 114.7 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 GMI_ES17_lrc7334_312 locus 114.7 () Automated name-based View Maps
GMI_ES05_c9640_317 locus 63.2 Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 GMI_ES05_c9640_317 locus 114.7 () Automated name-based View Maps
Oat - Oat-2016-IL5 - Oat-2016-IL5_SS13 GMI_ES05_c9640_317 locus 28.1 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 GMI_ES05_c9640_317 locus 114.7 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_3 GMI_ES05_c9640_317 locus 134.6 () Automated name-based View Maps
Oat - Oat-2016-OxP - Oat-2016-OxP_4 GMI_ES05_c9640_317 locus 34.1 () Automated name-based View Maps
GMI_ES14_c10289_533 locus 63.2 Oat - Oat-2016-PxG - Oat-2016-PxG_6a GMI_ES14_c10289_533 locus 78.5 () Automated name-based View Maps
Oat - Oat-2016-KxO - Oat-2016-KxO_22 GMI_ES14_c10289_533 locus 20.4 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_3 GMI_ES14_c10289_533 locus 134.6 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 GMI_ES14_c10289_533 locus 114.7 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 GMI_ES14_c10289_533 locus 114.7 () Automated name-based View Maps
avgbs_113791 locus 63.2 Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 avgbs_113791 locus 114.7 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 avgbs_113791 locus 114.7 () Automated name-based View Maps
GMI_ES05_c8916_635 locus 63.2 Oat - Oat-2016-OxT - Oat-2016-OxT_3 GMI_ES05_c8916_635 locus 131.6 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 GMI_ES05_c8916_635 locus 111.3 () Automated name-based View Maps
Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_39 GMI_ES05_c8916_635 locus 36.07 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 GMI_ES05_c8916_635 locus 111.3 () Automated name-based View Maps
Oat - Oat-2017-UTauxU017 - Oat-2017-UTauxU017-4 GMI_ES05_c8916_635 locus 96.51 (cM) Automated name-based View Maps
Oat - Oat-2016-AxM - Oat-2016-AxM_28b GMI_ES05_c8916_635 locus 34.4 () Automated name-based View Maps
Oat - Oat-2016-IL5 - Oat-2016-IL5_SS13 GMI_ES05_c8916_635 locus 28.1 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.