*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2016-OxP
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-2016-OxP_13
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2016-OxP [ View Map Set Info ]
Map Name: Oat-2016-OxP_13
Map Start: 0.00
Map Stop: 14.00
Features by Type:
16 locus
16 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 16 of 16.
Oat - Oat-2016-OxP - Oat-2016-OxP_13
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
GMI_ES02_c10836_312 locus 0.00 Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES02_c10836_312 locus 26.70 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg01 GMI_ES02_c10836_312 locus 26.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES02_c10836_312 locus 26.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES02_c10836_312 locus 26.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-1 GMI_ES02_c10836_312 locus 26.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-11 GMI_ES02_c10836_312 locus 26.70 () Automated name-based View Maps
Oat - Avena_2013_SNP - Avena_2013_SNP_5C GMI_ES02_c10836 locus 2.84 () Automated name-based View Maps
GMI_ES17_c1186_142 locus 1.10 Oat - Oat-2017-U01BxU006 - Oat-2017-U01BxU006-2 GMI_ES17_c1186_142 locus 102.11 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES17_c1186_142 locus 24.70 () Automated name-based View Maps
Oat - Avena_2013_SNP - Avena_2013_SNP_5C GMI_ES17_c1186 locus 5.61 () Automated name-based View Maps
Oat - Oat-2017-UTauxU017 - Oat-2017-UTauxU017-3 GMI_ES17_c1186_142 locus 5.00 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-1 GMI_ES17_c1186_142 locus 24.70 () Automated name-based View Maps
Oat - Oat-2016-BxG - Oat-2016-BxG_14a GMI_ES17_c1186_142 locus 135.90 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg01 GMI_ES17_c1186_142 locus 24.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES17_c1186_142 locus 24.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES17_c1186_142 locus 24.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-11 GMI_ES17_c1186_142 locus 24.70 () Automated name-based View Maps
GMI_ES03_c9748_579 locus 2.70 Oat - Oat-2016-KxO - Oat-2016-KxO_2 GMI_ES03_c9748_579 locus 17.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES03_c9748_579 locus 20.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES03_c9748_579 locus 20.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-11 GMI_ES03_c9748_579 locus 20.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-1 GMI_ES03_c9748_579 locus 20.70 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg01 GMI_ES03_c9748_579 locus 20.70 () Automated name-based View Maps
Oat - Oat-2016-IL4 - Oat-2016-IL4_7 GMI_ES03_c9748_579 locus 26.70 () Automated name-based View Maps
Oat - Oat-2016-PxB - Oat-2016-PxB_5 GMI_ES03_c9748_579 locus 16.90 () Automated name-based View Maps
Oat - Oat-2017-U01BxU006 - Oat-2017-U01BxU006-2 GMI_ES03_c9748_579 locus 99.03 (cM) Automated name-based View Maps
Oat - Oat-2016-IL5 - Oat-2016-IL5_SS11a GMI_ES03_c9748_579 locus 78.10 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES03_c9748_579 locus 20.70 () Automated name-based View Maps
GMI_ES01_c4802_480 locus 2.70 Oat - Oat-2016-Consensus - Oat-2016-Consensus-11 GMI_ES01_c4802_480 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-1 GMI_ES01_c4802_480 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-KxO - Oat-2016-KxO_2 GMI_ES01_c4802_480 locus 18.90 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg01 GMI_ES01_c4802_480 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES01_c4802_480 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES01_c4802_480 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES01_c4802_480 locus 23.80 () Automated name-based View Maps
avgbs_96443 locus 2.70 Oat - Oat-2016-Consensus - Oat-2016-Consensus-11 avgbs_96443 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_96443 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-1 avgbs_96443 locus 23.80 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg01 avgbs_96443 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_96443 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_96443 locus 23.80 () Automated name-based View Maps
avgbs_120934 locus 2.70 Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_120934 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-11 avgbs_120934 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_120934 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-1 avgbs_120934 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_120934 locus 23.80 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg01 avgbs_120934 locus 23.80 () Automated name-based View Maps
avgbs_114524 locus 2.70 Oat - Oat-2016-Consensus - Oat-2016-Consensus-1 avgbs_114524 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_114524 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-11 avgbs_114524 locus 23.80 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg01 avgbs_114524 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_114524 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_114524 locus 23.80 () Automated name-based View Maps
avgbs_108172 locus 2.70 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg01 avgbs_108172 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-1 avgbs_108172 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_108172 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-11 avgbs_108172 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_108172 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_108172 locus 23.80 () Automated name-based View Maps
avgbs_203370 locus 2.70 Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_203370 locus 19.50 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_203370 locus 19.50 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-1 avgbs_203370 locus 19.50 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg01 avgbs_203370 locus 19.50 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-11 avgbs_203370 locus 19.50 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_13 avgbs_203370 locus 23.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_203370 locus 19.50 () Automated name-based View Maps
GMI_ES15_c6191_370 locus 2.70 Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_6 GMI_ES15_c6191_370 locus 32.21 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES15_c6191_370 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-11 GMI_ES15_c6191_370 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-IL5 - Oat-2016-IL5_SS11a GMI_ES15_c6191_370 locus 75.90 () Automated name-based View Maps
Oat - Avena_2013_SNP - Avena_2013_SNP_5C GMI_ES15_c6191 locus 6.17 () Automated name-based View Maps
Oat - Oat-2016-KxO - Oat-2016-KxO_2 GMI_ES15_c6191_370 locus 18.90 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES15_c6191_370 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-IL4 - Oat-2016-IL4_7 GMI_ES15_c6191_370 locus 20.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-1 GMI_ES15_c6191_370 locus 23.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES15_c6191_370 locus 23.80 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg01 GMI_ES15_c6191_370 locus 23.80 () Automated name-based View Maps
avgbs_103695 locus 5.70 Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_103695 locus 15.30 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_103695 locus 15.30 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_103695 locus 15.30 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-11 avgbs_103695 locus 15.30 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-1 avgbs_103695 locus 15.30 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg01 avgbs_103695 locus 15.30 () Automated name-based View Maps
avgbs_103126 locus 8.80 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg01 avgbs_103126 locus 12.90 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_103126 locus 12.90 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-1 avgbs_103126 locus 12.90 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_103126 locus 12.90 () Automated name-based View Maps
Oat - Oat-2016-HxZ - Oat-2016-HxZ_ss3 avgbs_103126 locus 6.30 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_103126 locus 12.90 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-11 avgbs_103126 locus 12.90 () Automated name-based View Maps
avgbs_33904 locus 8.80 Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_33904 locus 12.90 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_33904 locus 12.90 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-11 avgbs_33904 locus 12.90 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-1 avgbs_33904 locus 12.90 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 avgbs_33904 locus 12.90 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg01 avgbs_33904 locus 12.90 () Automated name-based View Maps
GMI_ES02_c13759_273 locus 8.80 Oat - Oat-2016-Consensus - Oat-2016-Consensus-11 GMI_ES02_c13759_273 locus 12.90 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-1 GMI_ES02_c13759_273 locus 12.90 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_13 GMI_ES02_c13759_273 locus 14.20 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg01 GMI_ES02_c13759_273 locus 12.90 () Automated name-based View Maps
Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_6 GMI_ES02_c13759_273 locus 8.48 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES02_c13759_273 locus 12.90 () Automated name-based View Maps
Oat - Oat-2016-IL4 - Oat-2016-IL4_7 GMI_ES02_c13759_273 locus 41.60 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES02_c13759_273 locus 12.90 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES02_c13759_273 locus 12.90 () Automated name-based View Maps
Oat - Oat-2016-PxB - Oat-2016-PxB_5 GMI_ES02_c13759_273 locus 4.50 () Automated name-based View Maps
GMI_ES03_c17272_213 locus 14.00 Oat - Oat-2017-U01BxU006 - Oat-2017-U01BxU006-49 GMI_ES03_c17272_213 locus 0.00 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES03_c17272_213 locus 0.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES03_c17272_213 locus 0.00 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg01 GMI_ES03_c17272_213 locus 0.00 () Automated name-based View Maps
Oat - Oat-2016-IL4 - Oat-2016-IL4_7 GMI_ES03_c17272_213 locus 72.60 () Automated name-based View Maps
Oat - Oat-2017-UTauxU017 - Oat-2017-UTauxU017-43 GMI_ES03_c17272_213 locus 13.64 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES03_c17272_213 locus 0.00 () Automated name-based View Maps
Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_6 GMI_ES03_c17272_213 locus 0.00 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-11 GMI_ES03_c17272_213 locus 0.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-1 GMI_ES03_c17272_213 locus 0.00 () Automated name-based View Maps
GMI_ES22_c18942_308 locus 14.00 Oat - Oat-2016-IL4 - Oat-2016-IL4_7 GMI_ES22_c18942_308 locus 72.60 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES22_c18942_308 locus 0.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-1 GMI_ES22_c18942_308 locus 0.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-11 GMI_ES22_c18942_308 locus 0.00 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg01 GMI_ES22_c18942_308 locus 0.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES22_c18942_308 locus 0.00 () Automated name-based View Maps
Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_6 GMI_ES22_c18942_308 locus 0.00 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES22_c18942_308 locus 0.00 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.