*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2016-OxP
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-2016-OxP_3
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2016-OxP [ View Map Set Info ]
Map Name: Oat-2016-OxP_3
Map Start: 0.00
Map Stop: 119.70
Features by Type:
64 locus
64 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 64.       of 3 | Next
Oat - Oat-2016-OxP - Oat-2016-OxP_3
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
GMI_ES14_c6436_578 locus 0.00 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 GMI_ES14_c6436_578 locus 14.40 () Automated name-based View Maps
Oat - Oat-2016-KxO - Oat-2016-KxO_13 GMI_ES14_c6436_578 locus 88.60 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 GMI_ES14_c6436_578 locus 14.40 () Automated name-based View Maps
GMI_ES05_c12462_118 locus 0.00 Oat - Oat-2016-KxO - Oat-2016-KxO_13 GMI_ES05_c12462_118 locus 88.60 () Automated name-based View Maps
Oat - Oat-2016-SxH - Oat-2016-SxH_16 GMI_ES05_c12462_118 locus 1.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 GMI_ES05_c12462_118 locus 14.40 () Automated name-based View Maps
Oat - Oat-2017-UTauxU017 - Oat-2017-UTauxU017-15 GMI_ES05_c12462_118 locus 1.51 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 GMI_ES05_c12462_118 locus 14.40 () Automated name-based View Maps
Oat - Oat-2016-DxE - Oat-2016-DxE_24 GMI_ES05_c12462_118 locus 0.80 () Automated name-based View Maps
avgbs_97014 locus 7.90 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 avgbs_97014 locus 25.10 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 avgbs_97014 locus 25.10 () Automated name-based View Maps
avgbs_218978 locus 9.00 Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 avgbs_218978 locus 33.70 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 avgbs_218978 locus 33.70 () Automated name-based View Maps
avgbs_217640 locus 9.00 Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 avgbs_217640 locus 33.70 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_12b avgbs_217640 locus 36.00 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 avgbs_217640 locus 33.70 () Automated name-based View Maps
avgbs_52901 locus 9.00 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 avgbs_52901 locus 33.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 avgbs_52901 locus 33.70 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_12b avgbs_52901 locus 36.00 () Automated name-based View Maps
avgbs_68479 locus 9.00 Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 avgbs_68479 locus 33.70 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 avgbs_68479 locus 33.70 () Automated name-based View Maps
avgbs_116567 locus 9.00 Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 avgbs_116567 locus 33.70 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 avgbs_116567 locus 33.70 () Automated name-based View Maps
avgbs_93946 locus 9.00 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 avgbs_93946 locus 33.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 avgbs_93946 locus 33.70 () Automated name-based View Maps
GMI_GBS_79645 locus 11.20 Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_17 GMI_GBS_79645 locus 61.71 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 GMI_GBS_79645 locus 34.80 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 GMI_GBS_79645 locus 34.80 () Automated name-based View Maps
Oat - Oat-2016-AxM - Oat-2016-AxM_14 GMI_GBS_79645 locus 61.50 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_8 GMI_GBS_79645 locus 10.20 () Automated name-based View Maps
GMI_ES01_c17690_632 locus 12.30 Oat - Oat-2016-KxO - Oat-2016-KxO_13 GMI_ES01_c17690_632 locus 61.10 () Automated name-based View Maps
Oat - Oat-2017-UTauxU017 - Oat-2017-UTauxU017-15 GMI_ES01_c17690_632 locus 23.92 (cM) Automated name-based View Maps
Oat - Oat-2016-DxE - Oat-2016-DxE_24 GMI_ES01_c17690_632 locus 28.10 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 GMI_ES01_c17690_632 locus 35.40 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 GMI_ES01_c17690_632 locus 35.40 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_12b GMI_ES01_c17690_632 locus 36.00 () Automated name-based View Maps
avgbs_221051 locus 15.20 Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 avgbs_221051 locus 41.80 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 avgbs_221051 locus 41.80 () Automated name-based View Maps
avgbs_109134 locus 15.20 Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 avgbs_109134 locus 41.80 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 avgbs_109134 locus 41.80 () Automated name-based View Maps
avgbs_121117 locus 15.20 Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 avgbs_121117 locus 41.80 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 avgbs_121117 locus 41.80 () Automated name-based View Maps
avgbs_218464 locus 19.10 Oat - Oat-2016-OxT - Oat-2016-OxT_12b avgbs_218464 locus 42.60 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 avgbs_218464 locus 44.50 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 avgbs_218464 locus 44.50 () Automated name-based View Maps
avgbs_13022 locus 19.10 Oat - Oat-2016-OxT - Oat-2016-OxT_12b avgbs_13022 locus 43.60 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 avgbs_13022 locus 45.20 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 avgbs_13022 locus 45.20 () Automated name-based View Maps
avgbs_56455 locus 24.70 Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 avgbs_56455 locus 51.70 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 avgbs_56455 locus 51.70 () Automated name-based View Maps
avgbs_40232 locus 24.70 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 avgbs_40232 locus 51.70 () Automated name-based View Maps
Oat - Oat-2016-HxZ - Oat-2016-HxZ_MP11 avgbs_40232 locus 2.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 avgbs_40232 locus 51.70 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_12b avgbs_40232 locus 51.40 () Automated name-based View Maps
avgbs_63065 locus 26.00 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 avgbs_63065 locus 53.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 avgbs_63065 locus 53.00 () Automated name-based View Maps
avgbs_67059 locus 28.60 Oat - Oat-2016-HxZ - Oat-2016-HxZ_MP11 avgbs_67059 locus 2.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 avgbs_67059 locus 55.60 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 avgbs_67059 locus 55.60 () Automated name-based View Maps
avgbs_218717 locus 28.60 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 avgbs_218717 locus 55.60 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 avgbs_218717 locus 55.60 () Automated name-based View Maps
avgbs_203085 locus 28.60 Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 avgbs_203085 locus 55.60 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 avgbs_203085 locus 55.60 () Automated name-based View Maps
Oat - Oat-2016-HxZ - Oat-2016-HxZ_MP11 avgbs_203085 locus 2.00 () Automated name-based View Maps
GMI_ES02_c32043_171 locus 29.80 Oat - Oat-2016-PxB - Oat-2016-PxB_19 GMI_ES02_c32043_171 locus 16.50 () Automated name-based View Maps
Oat - Oat-2016-AxM - Oat-2016-AxM_14 GMI_ES02_c32043_171 locus 39.70 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 GMI_ES02_c32043_171 locus 56.80 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 GMI_ES02_c32043_171 locus 56.80 () Automated name-based View Maps
Oat - Oat-2016-KxO - Oat-2016-KxO_13 GMI_ES02_c32043_171 locus 18.20 () Automated name-based View Maps
Oat - Oat-2016-HxZ - Oat-2016-HxZ_MP11 GMI_ES02_c32043_171 locus 2.00 () Automated name-based View Maps
Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_17 GMI_ES02_c32043_171 locus 41.06 (cM) Automated name-based View Maps
GMI_ES05_c15686_92 locus 32.00 Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 GMI_ES05_c15686_92 locus 59.00 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 GMI_ES05_c15686_92 locus 59.00 () Automated name-based View Maps
GMI_ES14_c2073_528 locus 38.10 Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_17 GMI_ES14_c2073_528 locus 34.45 (cM) Automated name-based View Maps
Oat - Oat-2017-U01BxU006 - Oat-2017-U01BxU006-5 GMI_ES14_c2073_528 locus 91.26 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 GMI_ES14_c2073_528 locus 65.30 () Automated name-based View Maps
Oat - Oat-2017-UTauxU017 - Oat-2017-UTauxU017-9 GMI_ES14_c2073_528 locus 3.28 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 GMI_ES14_c2073_528 locus 65.30 () Automated name-based View Maps
Oat - Oat-2016-AxM - Oat-2016-AxM_14 GMI_ES14_c2073_528 locus 33.70 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.