*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2018-Consensus
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-2018-Consensus_Mrg01
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2018-Consensus [ View Map Set Info ]
Map Name: Oat-2018-Consensus_Mrg01
Map Start: -11.8
Map Stop: 167.4
Features by Type:
6,843 locus
6,843 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 6,843.       Previous | of 274 | Next
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg01
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
avgbs2_43392.1 locus 7.9 Diploid oat - Oat-2019-A_atlantica-physical - Oat-2019-A_atl-phys_4As avgbs2_43392.1 locus 4 (cM) Automated name-based View Maps
avgbs2_43392.1.10 locus 7.9 No other positions
avgbs2_43392.1.39 locus 7.9 No other positions
avgbs_cluster_23917.1.22 locus 8.6 No other positions
avgbs2_111730.1.22 locus 8.6 No other positions
avgbs_428277 locus 8.8 No other positions
avgbs_43742 locus 8.8 No other positions
avgbs_cluster_16325.1 locus 8.9 No other positions
avgbs_cluster_16325.1.17 locus 8.9 No other positions
avgbs2_177182.1 locus 8.9 No other positions
avgbs2_177182.1.26 locus 8.9 No other positions
GMI_ES22_c13490_299 locus 9.2 Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES22_c13490_299 locus 9.2 () Automated name-based View Maps
Oat - Oat-2016-PxB - Oat-2016-PxB_5 GMI_ES22_c13490_299 locus 0 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-11 GMI_ES22_c13490_299 locus 9.2 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_13 GMI_ES22_c13490_299 locus 8 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES22_c13490_299 locus 9.2 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-1 GMI_ES22_c13490_299 locus 9.2 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_ES22_c13490_299 locus 9.2 () Automated name-based View Maps
avgbs2_1095.1.48 locus 9.2 No other positions
avgbs2_1095.1.55 locus 9.2 No other positions
avgbs2_117922.1 locus 9.2 No other positions
avgbs2_117922.1.36 locus 9.2 No other positions
avgbs2_117922.1.6 locus 9.2 No other positions
avgbs_109203 locus 9.3 No other positions
avgbs_391421 locus 9.5 No other positions
avgbs_427996 locus 9.5 No other positions
avgbs_427996.1 locus 9.5 No other positions
avgbs_427996.1.32 locus 9.5 No other positions
avgbs2_30992.1 locus 9.5 No other positions
avgbs2_30992.1.32 locus 9.5 No other positions
avgbs2_47818.1.7 locus 9.5 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.