*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2018-Consensus
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-2018-Consensus_Mrg06
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2018-Consensus [ View Map Set Info ]
Map Name: Oat-2018-Consensus_Mrg06
Map Start: -1.9
Map Stop: 149.2
Features by Type:
4,232 locus
4,232 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 4,232.       of 170 | Next
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
GMI_ES01_c17020_193 locus 0 Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_17 GMI_ES01_c17020_193 locus 88.18 (cM) Automated name-based View Maps
Oat - Oat-2016-AxM - Oat-2016-AxM_14 GMI_ES01_c17020_193 locus 88.8 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 GMI_ES01_c17020_193 locus 0 () Automated name-based View Maps
avgbs2_80538.1.32 locus 0 No other positions
avgbs2_80538.1 locus 0 No other positions
avgbs2_73212.1.23 locus 0 No other positions
avgbs2_73212.1 locus 0 No other positions
avgbs2_6279.1.44 locus 0 No other positions
avgbs2_6279.1.22 locus 0 No other positions
avgbs2_6279.1 locus 0 No other positions
avgbs2_34242.1.55 locus 0 No other positions
avgbs2_34242.1.23 locus 0 No other positions
avgbs2_34242.1.22 locus 0 No other positions
avgbs2_34242.1 locus 0 No other positions
avgbs2_20477.1.25 locus 0 No other positions
avgbs2_20477.1 locus 0 No other positions
avgbs2_135952.1.40 locus 0 No other positions
avgbs2_135952.1 locus 0 No other positions
avgbs2_125444.1.19 locus 0 No other positions
avgbs2_125444.1 locus 0 No other positions
avgbs_cluster_9095.1.26 locus 0 No other positions
avgbs_cluster_9095.1 locus 0 No other positions
avgbs_cluster_5808.1.34 locus 0 No other positions
avgbs_cluster_5808.1 locus 0 No other positions
avgbs_cluster_44793.1.44 locus 0 No other positions
avgbs_cluster_44793.1.22 locus 0 No other positions
avgbs_cluster_44793.1 locus 0 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.