*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2018-Consensus
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-2018-Consensus_Mrg11
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2018-Consensus [ View Map Set Info ]
Map Name: Oat-2018-Consensus_Mrg11
Map Start: -14.40
Map Stop: 125.70
Features by Type:
5,514 locus
5,514 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 5,514.       of 221 | Next
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg11
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
GMI_DS_LB_10197 locus 0.00 Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 GMI_DS_LB_10197 locus 0.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 GMI_DS_LB_10197 locus 0.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 GMI_DS_LB_10197 locus 0.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 GMI_DS_LB_10197 locus 0.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 GMI_DS_LB_10197 locus 0.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 GMI_DS_LB_10197 locus 0.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-11 GMI_DS_LB_10197 locus 0.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 GMI_DS_LB_10197 locus 0.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 GMI_DS_LB_10197 locus 0.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 GMI_DS_LB_10197 locus 0.00 () Automated name-based View Maps
Oat - Oat-2016-OxP - Oat-2016-OxP_12 GMI_DS_LB_10197 locus 0.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 GMI_DS_LB_10197 locus 0.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 GMI_DS_LB_10197 locus 0.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 GMI_DS_LB_10197 locus 0.00 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-11 GMI_DS_LB_10197 locus 0.00 () Automated name-based View Maps
avgbs2_36649.2.56 locus 0.00 No other positions
avgbs2_36649.2.25 locus 0.00 No other positions
avgbs2_36649.2 locus 0.00 No other positions
avgbs2_163255.1.57 locus 0.00 No other positions
avgbs2_163255.1.46 locus 0.00 No other positions
avgbs2_163255.1.34 locus 0.00 No other positions
avgbs2_163255.1 locus 0.00 No other positions
AB_AM_219-295 locus 125.70 Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 AB_AM_219-295 locus 125.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 AB_AM_219-295 locus 125.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 AB_AM_219-295 locus 125.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-11 AB_AM_219-295 locus 125.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 AB_AM_219-295 locus 125.70 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_19 AB_AM_219-295 locus 86.40 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 AB_AM_219-295 locus 125.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 AB_AM_219-295 locus 125.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-11 AB_AM_219-295 locus 125.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 AB_AM_219-295 locus 125.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 AB_AM_219-295 locus 125.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 AB_AM_219-295 locus 125.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 AB_AM_219-295 locus 125.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 AB_AM_219-295 locus 125.70 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 AB_AM_219-295 locus 125.70 () Automated name-based View Maps
avgbs_51160 locus 112.50 No other positions
avgbs_67838 locus 110.70 No other positions
avgbs_6K_50325 locus 109.90 No other positions
avgbs_30267 locus 109.80 No other positions
avgbs_46549 locus 109.70 No other positions
avgbs_cluster_25967.1.16 locus 109.60 No other positions
avgbs_cluster_25967.1 locus 109.60 No other positions
avgbs_15271.1.29 locus 109.60 No other positions
avgbs_15271.1 locus 109.60 No other positions
avgbs2_20575.1.18 locus 109.20 No other positions
avgbs2_20575.1 locus 109.20 No other positions
avgbs_cluster_35060.1.43 locus 109.20 No other positions
avgbs_cluster_17568.1.18 locus 109.20 No other positions
avgbs_cluster_17568.1 locus 109.20 No other positions
avgbs2_65285.1.35 locus 109.10 No other positions
avgbs2_65285.1 locus 109.10 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.