*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2018-Consensus
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-2018-Consensus_Mrg20
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2018-Consensus [ View Map Set Info ]
Map Name: Oat-2018-Consensus_Mrg20
Map Start: -1.3
Map Stop: 261
Features by Type:
5,958 locus
5,958 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 5,958.       Previous | of 239 | Next
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg20
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
avgbs2_69257.1.21 locus 253.4 No other positions
avgbs2_69257.1 locus 253.4 No other positions
avgbs2_40366.1.11 locus 253.4 No other positions
avgbs2_40366.1 locus 253.4 No other positions
avgbs2_33953.2.60 locus 253.4 No other positions
avgbs2_33953.2.38 locus 253.4 No other positions
avgbs2_33953.2.37 locus 253.4 No other positions
avgbs2_33953.2.33 locus 253.4 No other positions
avgbs2_33953.2 locus 253.4 No other positions
avgbs2_141417.1.53 locus 253.4 No other positions
avgbs2_141417.1.46 locus 253.4 No other positions
avgbs2_141417.1.26 locus 253.4 No other positions
avgbs2_141417.1 locus 253.4 No other positions
avgbs_cluster_46471.1.6 locus 253.4 No other positions
avgbs_cluster_29664.1.53 locus 253.4 No other positions
avgbs_cluster_29664.1.46 locus 253.4 No other positions
avgbs_cluster_29664.1.26 locus 253.4 No other positions
avgbs_cluster_29664.1 locus 253.4 No other positions
avgbs_cluster_26529.1.7 locus 253.4 No other positions
avgbs_cluster_26529.1 locus 253.4 No other positions
avgbs_cluster_14098.1.21 locus 253.4 No other positions
avgbs_cluster_14098.1 locus 253.4 No other positions
avgbs_90691 locus 253.4 Oat - Oat-2016-Consensus - Oat-2016-Consensus-20 avgbs_90691 locus 253.4 () Automated name-based View Maps
avgbs_63179.1.15 locus 253.4 No other positions
avgbs_63179.1 locus 253.4 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.