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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Oat-Oat-2020-CORE-SV
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Maps Oat-2020-CORE-SV_Mrg24
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
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Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
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BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
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Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2020-CORE-SV [ View Map Set Info ]
Map Name: Oat-2020-CORE-SV_Mrg24
Map Start: 0 cM
Map Stop: 41.8 cM
Features by Type:
3 locus
2 qtl
5 Total

Map Features

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Items 1 to 5 of 5.
Oat - Oat-2020-CORE-SV - Oat-2020-CORE-SV_Mrg24
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AB_SC_02 locus 0 Oat - Oat-2016-Consensus - Oat-2016-Consensus-24 AB_SC_02 locus 0 () Automated name-based View Maps
Oat - Oat-2020-CORE-BG - Oat-2020-CORE-BG_Mrg24 AB_SC_02 locus 0 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg24 AB_SC_02 locus 0 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_14b AB_SC_02 locus 30.4 () Automated name-based View Maps
avgbs2_169934.1.10 locus 41.3 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg24 avgbs2_169934.1.10 locus 41.3 () Automated name-based View Maps
avgbs_120739.1.46 locus 41.8 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg24 avgbs_120739.1.46 locus 41.8 () Automated name-based View Maps
QSL_5.CORE-SV_Mrg24 qtl 41.3 No other positions
QRG_5.CORE-SV_Mrg24 qtl 41.8 No other positions

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