*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link

**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat, AxM Doubled Haploid, 2008
(Reference Set)
Align Vertically
Maps Oat-AxM-DH2008-28
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Always Display
Show Labels: None Landmarks All
Collapse Overlapping
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Greater Than
Automated name-based
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Number of
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat, AxM Doubled Haploid, 2008 [ View Map Set Info ]
Map Name: Oat-AxM-DH2008-28
Map Start: 0.00
Map Stop: 33.00
Features by Type:
9 locus
9 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 9 of 9.
Oat - Oat, AxM Doubled Haploid, 2008 - Oat-AxM-DH2008-28
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
HVM20 locus 12.00 Barley - Barley, AxHs/QTL - Hordeum-Pillen-1H HVM20 locus 59.00 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-1H HVM0020 locus 50.90 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-1H HVM20 locus 59.40 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-1H HVM20 locus 58.00 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-1H HVM20 locus 35.80 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-1H HVM20 locus 49.30 () Automated name-based View Maps
Barley - Barley, HN x H602, Sato2009 - Hv-HNxH602-1H HVM20 locus 137.20 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-1H HVM20 locus 66.25 () Automated name-based View Maps
Barley - Barley, Cali-sib x BowmanBC, QTL - Hordeum-CxB-1H HVM20 locus 59.20 () Automated name-based View Maps
Barley - Barley, Lx41 - Hordeum-Lx41-1H HVM20 locus 29.10 () Automated name-based View Maps
ACC-CTTb locus 0.00 No other positions
GC-CCTg locus 6.00 No other positions
CGC-CGCj locus 14.00 No other positions
ACC-CCGm locus 15.00 No other positions
GG-CGCb locus 26.00 No other positions
CAC-CGCe locus 28.00 No other positions
A040+ISSR11a locus 30.00 No other positions
ACC-CCGg locus 33.00 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.