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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat, KxO/QTL
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-KxO/Q-25
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat, KxO/QTL [ View Map Set Info ]
Map Name: Oat-KxO/Q-25
Map Start: -0.60
Map Stop: 3.30
Features by Type:
2 locus
9 qtl
11 Total

Map Features

Restrict by Map:
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[ Download Feature Correspondence Data ]
Items 1 to 11 of 11.
Oat - Oat, KxO/QTL - Oat-KxO/Q-25
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xbcd1235 locus 0.00 Oat - Oat, KxO - Oat-KxO-25 Xbcd1235 locus 0.00 () Automated name-based View Maps
Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-25-32 Xbcd1235 locus 0.00 () Automated name-based View Maps
Xcdo412A locus 2.70 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-25-32 Xcdo412A locus 4.00 () Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-25 Xcdo412A locus 2.70 () Automated name-based View Maps
Yield, KxO-25-a qtl -0.60 - 1.40 No other positions
Yield, KxO-25-b qtl -0.60 - 1.40 No other positions
Yield, KxO-25-c qtl -0.60 - 3.30 No other positions
Yield, KxO-25-d qtl -0.60 - 3.30 No other positions
Test weight, KxO-25-a qtl 1.20 - 3.30 No other positions
Test weight, KxO-25-b qtl -0.60 - 1.40 No other positions
Groat percentage, KxO-25 qtl 1.20 - 3.30 No other positions
BYDV, KxO-25 qtl -0.60 - 1.40 No other positions
Height, KxO-25 qtl 1.20 - 3.30 No other positions

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