*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat, KxO
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-KxO-17
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat, KxO [ View Map Set Info ]
Map Name: Oat-KxO-17
Map Start: 0
Map Stop: 83.7
Features by Type:
33 locus
33 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 33 of 33.       Previous | of 2
Oat - Oat, KxO - Oat-KxO-17
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xcdo1357A locus 50.3 No other positions
Xcdo1527B locus 37.6 Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-F Xcdo1527B locus 24.9 () Automated name-based View Maps
Xisu1247B locus 55.1 Oat - Oat-1997-KxO-QTL - Oat-1997-KxO-QTL_17 Xisu1247B locus 55.1 (cM) Automated name-based View Maps
Xumn370 locus 18 Oat - Oat-2009-MxN-RGA - Oat-2009-MxN-RGA_MN3 Xumn370 locus 64.5 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-17 umn370 locus 14.6 () Automated name-based View Maps
Oat - Oat-2013-MxN-RGA - Oat-2013-MxN-RGA_MN3 umn370 locus 83.6 (cM) Automated name-based View Maps
Oat - Oat-2010-MxN_PcQTL - Oat-2010-MxN_3 umn370 locus 83.6 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-2 UMN370 locus 73.3 () Automated name-based View Maps
Oat - Oat-1997-KxO-QTL - Oat-1997-KxO-QTL_17 umn370 locus 18 (cM) Automated name-based View Maps
Oat - Oat, MxN, genetic 2005 - Oat-MxN_2005-3 umn370 locus 61.7 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg02 UMN370 locus 73.3 () Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_17 UMN370 locus 36 (cM) Automated name-based View Maps
Oat - Oat-2009-MxN-RGA - Oat-2009-MxN-RGA_MN3 umn370 locus 64.5 (cM) Automated name-based View Maps
Oat - Oat-1997-KxO-QTL - Oat-1997-KxO-QTL_17 Xumn370 locus 18 (cM) Automated name-based View Maps
Xumn441A locus 18 Oat - Oat-2001-KxO-QTL - Oat-2001-KxO-QTL_17 Xumn441a locus 12 (cM) Automated name-based View Maps
Xumn464A locus 17.3 Oat - Oat-2004-KxO-RGA - Oat-2004-KxO-RGA_KO17 Xumn464A locus 44.12 (cM) Automated name-based View Maps
Oat - Oat-2006-KxO-RGA - Oat-2006-KxO-RGA_KO17 Xumn464A locus 35.88 (cM) Automated name-based View Maps
Xwg420A locus 15.2 Barley - H. bulbosum, PB1 x PB11 - Hbulbosum-PB1xPB11-7 Xwg420A locus 49 () Automated name-based View Maps
Xisu1364 locus 37.6 Oat - Oat-2009-SxW-RGA - Oat-2009-SxW-RGA_AswAC Xisu1364 locus 0 (cM) Automated name-based View Maps
Diploid oat - Diploid Oat, Iowa St. - Avena-Wise-D ISU1364 locus 432.6 () Automated name-based View Maps
Oat - Oat-1997-KxO-QTL - Oat-1997-KxO-QTL_17 Xisu1364 locus 37.6 (cM) Automated name-based View Maps
Oat - Oat-2013-SxW-RGA - Oat-2013-SxW-RGA_AswAC Xisu1364 locus 32 (cM) Automated name-based View Maps
Oat - Oat-2013-SxW-RGA - Oat-2013-SxW-RGA_AswAC isu1364 locus 32 (cM) Automated name-based View Maps
Oat - Oat-1997-KxO-QTL - Oat-1997-KxO-QTL_17 ISU1364 locus 37.6 (cM) Automated name-based View Maps
Oat - Oat-2009-SxW-RGA - Oat-2009-SxW-RGA_AswAC isu1364 locus 0 (cM) Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.