*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat, KxO, AFLP
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-KxO/AFLP-6-37
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat, KxO, AFLP [ View Map Set Info ]
Map Name: Oat-KxO/AFLP-6-37
Map Start: 0
Map Stop: 182
Features by Type:
33 locus
33 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 33 of 33.       Previous | of 2
Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-6-37
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xcdo82 locus 150 Oat - Oat-2014-AB_QTL_KxO - Oat-2014-KxO_6b Xcdo82 locus 37 (cM) Automated name-based View Maps
Oat - Oat-2001-KxO-QTL - Oat-2001-KxO-QTL_6 Xcdo82 locus 20 (cM) Automated name-based View Maps
Oat - Oat-1996-ROxpg9 - Oat-1996-ROxpg9_6 Xcdo82 locus 1.2 (cM) Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-6 Xcdo82 locus 22.1 () Automated name-based View Maps
Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-A Xcdo82 locus 50.6 () Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_6 Xcdo82 locus 20 (cM) Automated name-based View Maps
Oat - Oat-2004-KxO-RGA - Oat-2004-KxO-RGA_KO6 Xcdo82 locus 69.53 (cM) Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-6 Xcdo82 locus 22.1 () Automated name-based View Maps
Oat - Oat-2000-KxO-Bgl - Oat-2000-KxO-Bgl_6 Xcdo82 locus 0 () Automated name-based View Maps
e5m5-12A locus 154 No other positions
Xcdo708A locus 162 Oat - Oat, KxO - Oat-KxO-6 Xcdo708A locus 14.3 () Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_6 Xcdo708A locus 12.5 (cM) Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-6 Xcdo708A locus 14.3 () Automated name-based View Maps
Oat - Oat-2001-KxO-QTL - Oat-2001-KxO-QTL_6 Xcdo708A locus 12.5 (cM) Automated name-based View Maps
Oat - Oat-2002-OxT-QTL - Oat-2002-OxT-QTL_5 Xcdo708A locus 36.5 (cM) Automated name-based View Maps
e3m7-13 locus 164 No other positions
Xumn420 locus 164 Oat - Oat-2001-KxO - Oat-2001-KxO_6 Xumn420 locus 12.5 (cM) Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-6 Xumn420 locus 7.4 () Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-6 Xumn420 locus 7.4 () Automated name-based View Maps
Xumn162 locus 166 Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_23 Xumn162 locus 14 (cM) Automated name-based View Maps
Oat - Oat-1996-ROxpg9 - Oat-1996-ROxpg9_6 Xumn162 locus 0 (cM) Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-6 Xumn162 locus 11.2 () Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-6 Xumn162 locus 11.2 () Automated name-based View Maps
Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-A Xumn162 locus 5.9 () Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_6 Xumn162 locus 12.5 (cM) Automated name-based View Maps
e1m3-28 locus 170 No other positions
e3m7-8B locus 174 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.