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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat, KxO, AFLP
(Reference Set)
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Correspondences
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Maps Oat-KxO/AFLP-5
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
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locus
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Show Labels: None Landmarks All
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Features:
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
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 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
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Sanity Check:
No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat, KxO, AFLP [ View Map Set Info ]
Map Name: Oat-KxO/AFLP-5
Map Start: 0.00
Map Stop: 76.00
Features by Type:
17 locus
17 Total

Map Features

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Items 1 to 17 of 17.
Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-5
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
e8m3-7 locus 32.00 Oat - Oat, CxI - Oat-CxI-10 e8m3-7 locus 57.00 () Automated name-based View Maps
e1m2-3b locus 16.00 Oat - Oat, CxI - Oat-CxI-12 e1m2-3b locus 0.00 () Automated name-based View Maps
e5m7-5 locus 24.00 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-34 e5m7-5 locus 8.00 () Automated name-based View Maps
Oat - Oat, CxI - Oat-CxI-12 e5m7-5 locus 54.00 () Automated name-based View Maps
e5m7-6 locus 28.00 Oat - Oat, CxI - Oat-CxI-12 e5m7-6 locus 54.00 () Automated name-based View Maps
Xumn214B locus 0.00 Oat - Oat, KxO/QTL - Oat-KxO/Q-5 Xumn214B locus 49.40 () Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-5 Xumn214B locus 49.40 () Automated name-based View Maps
Xcdo1242 locus 0.00 Oat - Oat, KxO/QTL - Oat-KxO/Q-5 Xcdo1242 locus 46.10 () Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-5 Xcdo1242 locus 46.10 () Automated name-based View Maps
e1m6-3n locus 28.00 No other positions
e6m5-16 locus 28.00 No other positions
e6m6-6 locus 28.00 No other positions
Xumn106 locus 36.00 Oat - Oat, KxO/QTL - Oat-KxO/Q-5 Xumn106 locus 56.20 () Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-5 Xumn106 locus 58.20 () Automated name-based View Maps
Xbcd1580 locus 40.00 Oat - Oat, KxO/QTL - Oat-KxO/Q-5 Xbcd1580 locus 60.20 () Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-5 Xbcd1580 locus 62.20 () Automated name-based View Maps
Xbcd1897A locus 46.00 Oat - Oat, KxO - Oat-KxO-5 Xbcd1897A locus 66.40 () Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-5 Xbcd1897A locus 64.40 () Automated name-based View Maps
e2m3-8D locus 54.00 No other positions
e4m5-11 locus 62.00 No other positions
Xcdo1358 locus 68.00 Oat - Oat, KxO - Oat-KxO-5 Xcdo1358 locus 78.50 () Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-5 Xcdo1358 locus 76.50 () Automated name-based View Maps
Xcdo1081 locus 68.00 Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-F Xcdo1081 locus 21.70 () Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-5 Xcdo1081 locus 80.80 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-4D Xcdo1081 locus 87.00 () Automated name-based View Maps
Rye - Rye, UC90 x E-line - Secale-UxE-6 Xcdo1081 locus 35.20 () Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-5 Xcdo1081 locus 82.80 () Automated name-based View Maps
Rye - Rye_2009_consensus - Rye-2009-Consensus-6R Xcdo1081 locus 35.10 () Automated name-based View Maps
Xcdo1433 locus 76.00 Oat - Oat, KxO - Oat-KxO-5 Xcdo1433 locus 89.80 () Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-5 Xcdo1433 locus 87.80 () Automated name-based View Maps

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