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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat, OxT
(Reference Set)
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Correspondences
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Maps Oat-OxT-21
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat, OxT [ View Map Set Info ]
Map Name: Oat-OxT-21
Map Start: 0
Map Stop: 8.5
Features by Type:
2 locus
2 Total

Map Features

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Items 1 to 2 of 2.
Oat - Oat, OxT - Oat-OxT-21
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
cdo1473a locus 0 Oat - Oat-2001-KxO - Oat-2001-KxO_6 CDO1473A locus 12.5 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 CDO1473A locus 9.2 () Automated name-based View Maps
Oat - Oat-2016-KxO - Oat-2016-KxO_5 CDO1473A locus 130 () Automated name-based View Maps
Oat - Oat-2002-KxO - Oat-2002-KxO_6 cdo1473a locus 8 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg12 CDO1473A locus 9.2 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 CDO1473A locus 11.3 () Automated name-based View Maps
Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_22 cdo1473a locus 8 (cM) Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_6 CDO1473A locus 95 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg12 CDO1473A locus 11.3 () Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-6 cdo1473a locus 85.6 () Automated name-based View Maps
srgh1 locus 8.5 Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 sRGH1 locus 17 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg12 sRGH1 locus 17 () Automated name-based View Maps

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