*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Rice-Rice, BxOl
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Rice-CU-2
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Rice - Rice, BxOl [ View Map Set Info ]
Map Name: Rice-CU-2
Map Start: 0
Map Stop: 175
Features by Type:
74 locus
74 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 74.       Previous | of 3 | Next
Rice - Rice, BxOl - Rice-CU-2
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
RG152 locus 151.3 No other positions
RG157 locus 97.4 No other positions
RG171 locus 106.9 No other positions
RG252X locus 81.1 No other positions
RG256 locus 35.7 No other positions
RG322 locus 5.2 No other positions
RG365 locus 156.9 No other positions
RG437 locus 125.8 No other positions
RG520 locus 0 No other positions
RG555X locus 171.2 No other positions
RG654 locus 35.7 No other positions
RG886 locus 72.8 No other positions
RG905 locus 70.4 No other positions
RZ20X locus 3.5 No other positions
RZ58 locus 65.2 No other positions
RZ103 locus 46 No other positions
RZ123 locus 14.4 No other positions
RZ173 locus 66.1 No other positions
RZ204 locus 59.1 No other positions
RZ213 locus 9 Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-G Xrz213 locus 37 () Automated name-based View Maps
RZ217 locus 3.5 No other positions
RZ220 locus 160.1 No other positions
RZ260 locus 56 No other positions
RZ273 locus 49.4 Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-G Xrz273 locus 91.7 () Automated name-based View Maps
RZ318 locus 66.1 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.