*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat A-T. boeoticum x monococcum
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps T.b.xT.m.-5A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat A - T. boeoticum x monococcum [ View Map Set Info ]
Map Name: T.b.xT.m.-5A
Map Start: 0.00
Map Stop: 224.20
Features by Type:
32 locus
32 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 32.       of 2 | Next
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-5A
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xbarc117-5A locus 21.90 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5A barc117 locus 22.80 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-5A Xbarc117-5A locus 87.00 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xbarc117-5A locus 58.00 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5A Xbarc117-5A locus 29.00 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update barc117 locus 41.27 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-5A Xbarc117-5A locus 51.40 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_5 barc117 locus 41.27 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5A Xbarc117-5A locus 27.05 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xbarc117-5A locus 18.80 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5A Xbarc117-5A locus -0.86 () Automated name-based View Maps
Xbarc1-5A locus 18.70 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5A Xbarc1-5A locus 29.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xbarc1-5A locus 34.20 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5A Xbarc1-5A locus 0.46 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5A barc1 locus 23.90 () Automated name-based View Maps
Xbarc141-5A locus 83.00 Wheat ABD - Wheat_2014_i9K_Ug99_PIxLMPG - Wheat_2014_i9K_Ug99_PIxLMPG_5A barc141 locus 40.30 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xbarc141-5A locus 63.90 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5A Xbarc141-5A locus 0.46 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_5 barc141 locus 1.29 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xbarc141-5A locus 45.30 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5A Xbarc141-5A locus 46.50 () Automated name-based View Maps
Wheat AB - Wheat AB, Carotenoid QTL, 2017 - Wheat_AB_2017_Carotenoid_QTL-5A barc141 locus 87.90 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5A Xbarc141-5A locus 45.33 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5A barc141 locus 36.10 () Automated name-based View Maps
Xgwm186-5A locus 88.00 Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xgwm186-5A locus 29.30 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5A Xgwm186-5A locus 0.18 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgwm186-5A locus 75.80 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-5A Xgwm186-5A locus 129.70 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5A Xgwm186-5A locus 44.05 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm186-5A locus 42.30 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5A Xgwm186-5A locus 43.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xgwm186-5A locus 64.10 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-5A Xgwm186-5A locus 76.50 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm186-5A locus 64.40 () Automated name-based View Maps
Xgwm6-5A locus 211.00 Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-5A Xgwm6-5A locus 224.00 () Automated name-based View Maps
Wheat A - Wheat, 2013, Brittle culm - Wheat_Brittle_culm_2013-5A Xgwm6-5A locus 13.00 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5A Xgwm6-5A locus 147.69 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgwm6-5A locus 172.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm6-5A locus 120.50 () Automated name-based View Maps
Xgwm205-5A locus 60.60 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm205-5A locus 5.90 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5A Xgwm205-5A locus -0.86 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-5A Xgwm205-5A locus 27.20 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5A Xgwm205-5A locus 118.00 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-5A Xgwm205-5A locus 44.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xgwm205-5A locus 10.15 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgwm205-5A locus 22.20 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-5A Xgwm205-5A locus 38.90 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm205-5A locus 32.80 () Automated name-based View Maps
Xcfa2163-5A locus 150.00 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5A Xcfa2163-5A locus 0.68 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5A Xcfa2163-5A locus 137.20 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-5A Xcfa2163-5A locus 177.20 () Automated name-based View Maps
Wheat AB - Wheat AB, Carotenoid QTL, 2017 - Wheat_AB_2017_Carotenoid_QTL-3A cfa2163 locus 49.70 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A cfa2163 locus 25.40 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xcfa2163-5A locus 104.30 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5A cfa2163 locus 67.60 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-5A Xcfa2163-5A locus 99.70 () Automated name-based View Maps
Xgwm443-5A locus 49.00 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm443-5A locus 23.70 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-5A Xgwm443-5A locus 18.60 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-5A Xgwm443-5A locus 26.70 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5A Xgwm443-5A locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgwm443-5A locus -13.90 () Automated name-based View Maps
Xgwm154-5A locus 64.30 Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-5A Xgwm154-5A locus 21.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgwm154-5A locus 22.20 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-5A Xgwm154-5A locus 28.00 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm154-5A locus 34.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xgwm154-5A locus 10.35 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5A Xgwm154-5A locus -0.86 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm154-5A locus 4.10 () Automated name-based View Maps
Xcfa2141-5A locus 150.90 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xcfa2141-5A locus 135.30 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5A Xcfa2141-5A locus 0.82 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5A cfa2141 locus 68.00 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5A Xcfa2141-5A locus 136.40 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D cfa2141 locus 71.10 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xcfa2141-5A locus 106.40 () Automated name-based View Maps
Xcfd39-5A locus 201.40 Wheat A - Wheat, 2013, Brittle culm - Wheat_Brittle_culm_2013-5A Xcfd39-5A locus 0.00 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5A Xcfd39-5A locus 0.94 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5A cfd39 locus 79.20 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xcfd39-5A locus 142.00 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4B cfd39 locus 62.10 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4D cfd39 locus 60.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xcfd39-5A locus 152.80 () Automated name-based View Maps
Xgwm126-5A locus 207.40 Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-5A Xgwm126-5A locus 193.50 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm126-5A locus 138.70 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5A Xgwm126-5A locus 142.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm126-5A locus 111.70 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xgwm126-5A locus 133.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgwm126-5A locus 167.00 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-5A Xgwm126-5A locus 154.80 () Automated name-based View Maps
Wheat A - Wheat, 2013, Brittle culm - Wheat_Brittle_culm_2013-5A Xgwm126-5A locus 7.40 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xgwm126-5A locus 161.10 () Automated name-based View Maps
Xpsr426-5A locus 135.80 Wheat ABD - Wheat, Gale - Ta-Gale-5A Xpsr426-5A locus 64.70 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5A Xpsr426-5A locus 115.30 () Automated name-based View Maps
Xbarc142-5A locus 150.00 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5A barc142 locus 67.10 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_5 barc142 locus 118.54 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B barc142 locus 73.20 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-5A Xbarc142-5A locus 124.30 () Automated name-based View Maps
Xbarc151-5A locus 117.00 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xbarc151-5A locus 95.30 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-5A Xbarc151-5A locus 117.90 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5A barc151 locus 51.80 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xbarc151-5A locus 64.00 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-5A Xbarc151-5A locus 132.50 () Automated name-based View Maps
Xbarc186-5A locus 18.10 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5A Xbarc186-5A locus 0.18 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xbarc186-5A locus 59.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xbarc186-5A locus 16.50 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5A barc186 locus 22.80 () Automated name-based View Maps
Xwmc150-5A locus 18.70 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xwmc150-5A locus 56.70 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-5A Xwmc150-5A locus 7.50 () Automated name-based View Maps
Xpsr549-5A locus 144.30 Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-5A Xpsr549-5A locus 0.00 () Automated name-based View Maps
BE496903-5A locus 0.00 No other positions
Xcfd40-5A locus 19.30 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D cfd40 locus 34.50 () Automated name-based View Maps
BE499835-5A locus 59.50 No other positions
Xwmc371-5A locus 94.50 No other positions
Xcfd2-5A.2 locus 96.30 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4B cfd2 locus 37.30 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2D cfd2 locus 33.50 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B cfd2 locus 41.30 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D cfd2 locus 75.60 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A cfd2 locus 82.90 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A cfd2 locus 68.40 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5A cfd2 locus 43.70 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B cfd2 locus 36.40 () Automated name-based View Maps
Xcfd12-5A locus 125.90 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D cfd12 locus 52.70 () Automated name-based View Maps
Xgwm271-5A locus 130.00 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.