*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat AB-T. turgidum, JK x Cham1
(Reference Set)
Wheat ABD-Wheat, Synthetic x Opata, GPW
Min.
Correspondences
Align Vertically
Stack
Maps Tturgidum-JKxC-1B Ta-Synthetic/Opata-GPW-1B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)




Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - T. turgidum, JK x Cham1 [ View Map Set Info ]
Map Name: Tturgidum-JKxC-1B
Map Start: 0.00
Map Stop: 400.30
Features by Type:
42 locus
42 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 42 of 42.       Previous | of 2
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-1B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xutv1181-1B.1 locus 79.70 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-1B Xutv1181-1B.1 locus 95.40 () Automated name-based View Maps
Xutv1181-1B.2 locus 86.00 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-1B Xutv1181-1B.2 locus 98.30 () Automated name-based View Maps
Xcdo1373-1B.1 locus 114.40 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-1B Xcdo1373-1B.1 locus 249.90 () Automated name-based View Maps
XPaggMcag10-1B locus 134.40 No other positions
XPacgMcgg11-1B locus 137.70 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-1B XPacgMcgg11-1B locus 138.50 () Automated name-based View Maps
XPaggMcat3-1B locus 146.20 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-1B XPaggMcat3-1B locus 132.20 () Automated name-based View Maps
XPaggMcgt6-1B locus 161.70 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-1B XPaggMcgt6-1B locus 146.60 () Automated name-based View Maps
XPaccMcgt9-1B locus 171.90 No other positions
Xuaz299-1B locus 176.20 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-1B Xuaz299-1B locus 181.10 () Automated name-based View Maps
Xbcd1495-1B locus 192.50 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-1B Xbcd1495-1B locus 173.20 () Automated name-based View Maps
XPacgMcgc3-1B locus 257.50 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-1B XPacgMcgc3-1B locus 235.80 () Automated name-based View Maps
Xcdo1373-1B.2 locus 270.00 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-1B Xcdo1373-1B.2 locus 114.10 () Automated name-based View Maps
XPaagMcgc10-1B locus 277.80 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-1B XPaagMcgc10-1B locus 261.90 () Automated name-based View Maps
Xuaz243-1B locus 326.30 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-1B Xuaz243-1B locus 310.90 () Automated name-based View Maps
XPaagMcag3-1B locus 329.80 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-1B XPaagMcag3-1B locus 316.50 () Automated name-based View Maps
XPaagMcac5-1B locus 385.80 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-1B XPaagMcac5-1B locus 343.70 () Automated name-based View Maps
XPaggMctg7-1B locus 400.30 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-1B XPaggMctg7-1B locus 331.70 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.