*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat AB-T. turgidum, JK x Cham1
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Tturgidum-JKxC-3A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - T. turgidum, JK x Cham1 [ View Map Set Info ]
Map Name: Tturgidum-JKxC-3A
Map Start: 0
Map Stop: 304.5
Features by Type:
23 locus
23 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 23 of 23.
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-3A
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Centromere-3A locus 55 Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Centromere-3A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-3A Centromere-3A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-3A Centromere-3A locus 52.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-3A Centromere-3A locus 46.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Centromere-3A locus 45.4 - 49.2 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-3A Centromere-3A locus 56 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3A Centromere-3A locus 72 () Automated name-based View Maps
Wheat ABD - 3A, CNN x WI - 3A, CNN x WI Centromere-3A locus 79 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-3A Centromere-3A locus 59.5 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Centromere-3A locus 17.3 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-3A Centromere-3A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-3A Centromere-3A locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-3A Centromere-3A locus 63.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Centromere-3A locus 121 - 127.1 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3A Centromere-3A locus 50.3 - 56.9 () Automated name-based View Maps
Xmwg30-3A locus 128.4 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3A mwg30 locus 181.67 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-3A Xmwg30-3A locus 32 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3A Xmwg30-3A locus 115.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-3A Xmwg30-3A locus 99.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xmwg30-3A locus 238.3 () Automated name-based View Maps
Barley - Barley, VxHs - Hordeum-Graner1-3H MWG30 locus 202 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-3A Xmwg30-3A locus 79.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Xmwg30-3A locus 85.1 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A mwg30 locus 84 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xmwg30-3A locus 88.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3A Xmwg30-3A locus 81.1 () Automated name-based View Maps
Xgwm369-3A locus 30 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-3A Xgwm369-3A locus 30.5 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3A Xgwm369-3A locus -0.72 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3A Xgwm369-3A locus 13.8 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-3A Xgwm369-3A locus 23 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xgwm369-3A locus 29.9 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-3A Xgwm369-3A locus -58.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Xgwm369-3A locus 10.05 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3A Xgwm369-3A locus 11 () Automated name-based View Maps
Wheat ABD - Wheat_Yr76_2016 - Wheat_Yr76_2016-3A Xgwm369-3A locus 23.4 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xgwm369-3A locus 39.9 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-3A Xgwm369-3A locus 8.8 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3A Xgwm369-3A locus 21.5 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-3A Xgwm369-3A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3A Xgwm369-3A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-3A Xgwm369-3A locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3A Xgwm369-3A locus 31.3 () Automated name-based View Maps
Xutv416-3A locus 121.4 Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Xutv416-3A locus 37.8 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3A Xutv416-3A locus 79 () Automated name-based View Maps
Xgwm155-3A locus 161.4 Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3A Xgwm155-3A locus 106.7 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-3A Xgwm155-3A locus 107.7 () Automated name-based View Maps
Wheat ABD - 3A, SxY, QTL - 3A-SxY Xgwm155-3A locus 235 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3A Xgwm155-3A locus 84.9 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-3A Xgwm155-3A locus 119.2 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3A Xgwm155-3A locus 139.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Xgwm155-3A locus 111.85 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3A Xgwm155-3A locus 118.4 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3A Xgwm155-3A locus 0.21 () Automated name-based View Maps
XksuG53-3A locus 0 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3A XksuG53-3A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-3A XksuG53-3A locus -51.6 () Automated name-based View Maps
XPaggMctg3-3A locus 7 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3A XPaggMctg3-3A locus 8.8 () Automated name-based View Maps
XPacgMctg13-3A locus 9.7 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3A XPacgMctg13-3A locus 14 () Automated name-based View Maps
Xbcd195-3A locus 80.3 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3A Xbcd195-3A locus 52 () Automated name-based View Maps
Xcdo718-3A locus 94.5 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3A Xcdo718-3A locus 61.6 () Automated name-based View Maps
Xmwg2158-3A locus 106.7 Barley - Barley, BinMap 2005 - Hordeum-Bins-3H MWG2158 locus 3 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H MWG2158 locus 13.76 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H MWG2158 locus 1.5 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H MWG2158 locus 17.1 () Automated name-based View Maps
Xutv601-3A locus 150.9 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3A Xutv601-3A locus 131.3 () Automated name-based View Maps
Xcdo534-3A locus 190.8 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3A Xcdo534-3A locus 141.9 () Automated name-based View Maps
XPaccMcat2-3A locus 205.9 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3A XPaccMcat2-3A locus 161.5 () Automated name-based View Maps
Xutv1151-3A locus 214 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3A Xutv1151-3A locus 192 () Automated name-based View Maps
Xutv920-3A locus 216.5 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3A Xutv920-3A locus 172.2 () Automated name-based View Maps
XPaggMctg6-3A locus 242.5 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3A XPaggMctg6-3A locus 285.5 () Automated name-based View Maps
XPacgMcgg3-3A locus 252.8 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3A XPacgMcgg3-3A locus 250.4 () Automated name-based View Maps
XPaagMcgc9-3A locus 263.3 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3A XPaagMcgc9-3A locus 305.5 () Automated name-based View Maps
XPacgMctg1-3A locus 272.4 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3A XPacgMctg1-3A locus 259.3 () Automated name-based View Maps
XPaccMcga1-3A locus 281.4 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3A XPaccMcga1-3A locus 271 () Automated name-based View Maps
Xutv1474-3A locus 289.1 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3A Xutv1474-3A locus 221.3 () Automated name-based View Maps
XPaggMcgg1-3A locus 304.5 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3A XPaggMcgg1-3A locus 238.9 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.