*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat AB-T. turgidum, JK x Cham1, 2
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Tturgidum-JKxC2-5B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - T. turgidum, JK x Cham1, 2 [ View Map Set Info ]
Map Name: Tturgidum-JKxC2-5B
Map Start: 0
Map Stop: 368.7
Features by Type:
26 locus
26 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 26.       of 2 | Next
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-5B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm234-5B locus 91.6 Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-5B Xgwm234-5B locus 57.3 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5B Xgwm234-5B locus 6.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xgwm234-5B locus -5 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-5B Xgwm234-5B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm234-5B locus 1 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5B Xgwm234-5B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5B Xgwm234-5B locus 38.1 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-5B Xgwm234-5B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm234-5B locus 1.8 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5B Xgwm234-5B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm234-5B locus -0.76 () Automated name-based View Maps
Xbcd307-5B locus 105.3 Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-5B Xbcd307-5B locus 75.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xbcd307-5B locus 62.2 () Automated name-based View Maps
Wheat ABD - 5BL, CS, 0.75-0.79 interval - 5BL, CS, 0.75-0.79 interval Xbcd307-5B locus 0.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xbcd307-5B locus 84 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-5B Xbcd307-5B locus 63.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xbcd307-5B locus 65.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5B Xbcd307-5B locus 37.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5B Xbcd307-5B locus 72.2 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5B Xbcd307-5B locus 36.8 () Automated name-based View Maps
Xbcd450-5B locus 165.4 Wheat ABD - 5BL, CS, 0.75-0.79 interval - 5BL, CS, 0.75-0.79 interval Xbcd450-5B locus 14 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5B Xbcd450-5B locus 99.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5B Xbcd450-5B locus 65.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xbcd450-5B locus 84.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xbcd450-5B locus 89.1 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5B Xbcd450-5B locus 63 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, Group 5 - Ta-Physical-Sarma-5B Xbcd450-5B locus 0.69 () Automated name-based View Maps
Xcnl11(Lpx-B2)-5B locus 163 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5B Xcnl11(Lpx-B2)-5B locus 59 () Automated name-based View Maps
Xcdo775-5B locus 177.7 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5B Xcdo775-5B locus 81.8 () Automated name-based View Maps
Xcdo87-5B locus 194.5 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5B Xcdo87-5B locus 99 () Automated name-based View Maps
XPaccMcgt3-5B locus 215.1 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5B XPaccMcgt3-5B locus 127.7 () Automated name-based View Maps
XPaccMcgt4-5B locus 220.2 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5B XPaccMcgt4-5B locus 136.9 () Automated name-based View Maps
XPaagMcag5-5B locus 228.3 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5B XPaagMcag5-5B locus 140.4 () Automated name-based View Maps
Xbcd1235-5B locus 238.9 Wheat ABD - 5BL, CS, 0.75-0.79 interval - 5BL, CS, 0.75-0.79 interval Xbcd1235-5B locus 40 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5B Xbcd1235-5B locus 151.8 () Automated name-based View Maps
Xcdo457-5B locus 247.6 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5B Xcdo457-5B locus 155.9 () Automated name-based View Maps
Wheat ABD - 5BL, CS, 0.75-0.79 interval - 5BL, CS, 0.75-0.79 interval Xcdo457-5B locus 38 () Automated name-based View Maps
XPaccMcat8-5B locus 262.4 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5B XPaccMcat8-5B locus 164.6 () Automated name-based View Maps
XPacgMcgc2-5B locus 227 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5B XPacgMcgc2-5B locus 181.1 () Automated name-based View Maps
XPaggMctg19-5B locus 287.9 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5B XPaggMctg19-5B locus 197.6 () Automated name-based View Maps
XPacgMcgg7-5B locus 0 No other positions
Xcdo665-5B.1 locus 14.9 No other positions
Xcdo665-5B.2 locus 20 No other positions
XPacgMcgg12-5B locus 33.8 No other positions
XPaagMctg6-5B locus 61.7 No other positions
XBM816579-5B locus 118.2 No other positions
XBM816242-5B locus 132.9 No other positions
XBM816940-5B locus 145.4 No other positions
XPacgMcag5-5B locus 302.8 No other positions
XPacgMcgg1-5B locus 323.1 No other positions
XPaggMcgt8-5B locus 344.7 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.