*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat AB-T. turgidum, JK x Cham1, 2
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Tturgidum-JKxC2-6A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - T. turgidum, JK x Cham1, 2 [ View Map Set Info ]
Map Name: Tturgidum-JKxC2-6A
Map Start: 0
Map Stop: 494.2
Features by Type:
33 locus
33 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 33.       of 2 | Next
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-6A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xbcd21-6A locus 387 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6A Xbcd21-6A locus -82 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xbcd21-6A locus 4.2 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6A Xbcd21-6A locus 152 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A Xbcd21-6A locus 5.4 () Automated name-based View Maps
Xbcd342-6A locus 122.9 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6A Xbcd342-6A locus -85.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A Xbcd342-6A locus 2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xbcd342-6A locus -2.3 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6A Xbcd342-6A locus 141.2 () Automated name-based View Maps
Wheat AB - T. turgidum, durum x dicoccoides - Tturgidum-Du-6A Xbcd342-6A locus -47.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-6A Xbcd342-6A locus -76 () Automated name-based View Maps
Xbcd1821-6A locus 129.2 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A Xbcd1821-6A locus 4.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xbcd1821-6A locus 2.6 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6A Xbcd1821-6A locus 153 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6A Xbcd1821-6A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-6A Xbcd1821-6A locus -73.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6A Xbcd1821-6A locus -83.5 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6A Xbcd1821-6A locus 8.5 () Automated name-based View Maps
XksuD27-6A locus 321 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-6A XksuD27-6A locus 80.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6A XksuD27-6A locus 81.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-6A XksuD27-6A locus 146.8 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6A XksuD27-6A locus 335.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6A XksuD27-6A locus 129.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A XksuD27-6A locus 103.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A XksuD27-6A locus 135.7 () Automated name-based View Maps
Xgwm427-6A locus 294.7 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6A Xgwm427-6A locus 0.95 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6A Xgwm427-6A locus 122.65 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-6A Xgwm427-6A locus 60.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A Xgwm427-6A locus 107.2 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6A Xgwm427-6A locus 171.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xgwm427-6A locus 131.2 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6A Xgwm427-6A locus 373.5 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-6A Xgwm427-6A locus 66 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-6A Xgwm427-6A locus 101.7 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6A Xgwm427-6A locus 93.2 () Automated name-based View Maps
Xutv1034-6A locus 154 Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-6A Xutv1034-6A locus 52.5 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6A Xutv1034-6A locus 191 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-6A Xutv1034-6A locus -56.2 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-6A Xutv1034-6A locus -61.5 () Automated name-based View Maps
Gli-A2 locus 164.8 Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-6A Gli-A2 locus 64.2 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-6A Gli-A2 locus -44.5 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6A Gli-A2 locus 206.4 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-6A Gli-A2 locus -49.8 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-6A Gli-A2 locus -34.1 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-6A Gli-A2 locus 32.6 () Automated name-based View Maps
Xcnl3-6A locus 53.7 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6A Xcnl3-6A locus 16.4 () Automated name-based View Maps
Xutv1151-6A.1 locus 66.6 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6A Xutv1151-6A.1 locus 35.3 () Automated name-based View Maps
Xutv1151-6A.2 locus 72.9 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6A Xutv1151-6A.2 locus 44 () Automated name-based View Maps
XPaagMcgc2-6A locus 91.2 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6A XPaagMcgc2-6A locus 68.7 () Automated name-based View Maps
XPaccMcga8-6A locus 114.1 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6A XPaccMcga8-6A locus 129 () Automated name-based View Maps
XPaccMcgt2-6A locus 197.3 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6A XPaccMcgt2-6A locus 180 () Automated name-based View Maps
Xcdo962-6A locus 143.9 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6A Xcdo962-6A locus 197.8 () Automated name-based View Maps
XPaagMcgc8-6A locus 214.4 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6A XPaagMcgc8-6A locus 237 () Automated name-based View Maps
XPacgMcgc5-6A locus 217.8 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6A XPacgMcgc5-6A locus 241.4 () Automated name-based View Maps
XPaccMcag4-6A locus 251.1 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6A XPaccMcag4-6A locus 259.2 () Automated name-based View Maps
XPaagMctg1-6A locus 263.2 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6A XPaagMctg1-6A locus 271.1 () Automated name-based View Maps
XPaccMcgt7-6A locus 235.4 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6A XPaccMcgt7-6A locus 275.3 () Automated name-based View Maps
Xutv1136-6A locus 278.3 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6A Xutv1136-6A locus 292 () Automated name-based View Maps
XPaccMcag5-6A locus 335.9 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6A XPaccMcag5-6A locus 352.4 () Automated name-based View Maps
XPacgMcgc1-6A locus 0 No other positions
XBM815936-6A locus 34.4 No other positions
XPaggMcgt13-6A locus 270.7 No other positions
XPaggMctg9-6A locus 309.4 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.