*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat AB-T. turgidum, Langdon x G18-16
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Tt-LxG-1B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - T. turgidum, Langdon x G18-16 [ View Map Set Info ]
Map Name: Tt-LxG-1B
Map Start: 0.00
Map Stop: 181.50
Features by Type:
26 locus
26 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 26.       of 2 | Next
Wheat AB - T. turgidum, Langdon x G18-16 - Tt-LxG-1B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
304224 locus 0.00 No other positions
XBarc128b locus 6.50 Wheat AB - Wheat AB, Carotenoid QTL, 2017 - Wheat_AB_2017_Carotenoid_QTL-1B barc128 locus 10.10 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2B barc128 locus 50.50 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B barc128 locus 19.40 () Automated name-based View Maps
372464 locus 14.80 No other positions
wPt-1139 locus 19.60 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B wPt-1139 locus 27.80 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-1139 locus 21.38 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_1 wPt-1139 locus 21.38 () Automated name-based View Maps
Xgwm1100 locus 22.70 No other positions
Xcfa2158b locus 27.10 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1B Xcfa2158b locus 21.00 () Automated name-based View Maps
Xgwm1028 locus 35.70 No other positions
344289 locus 52.50 No other positions
Xgwm752a locus 59.20 No other positions
Xgwm413 locus 63.60 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1B Xgwm413 locus 60.00 () Automated name-based View Maps
306582 locus 68.90 No other positions
Xgwm18 locus 74.00 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1B Xgwm18 locus 49.00 () Automated name-based View Maps
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 1B Xgwm18 locus 53.60 () Automated name-based View Maps
Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-1B Xgwm18 locus 66.80 () Automated name-based View Maps
Xgwm926 locus 77.40 No other positions
Xgwm498 locus 84.10 Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 1A Xgwm498 locus 59.20 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1B Xgwm498 locus 50.00 () Automated name-based View Maps
Xgwm947 locus 89.80 No other positions
wPt-3451 locus 99.30 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B wPt-3451 locus 45.00 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_1 wPt-3451 locus 63.12 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-1B wPt-3451-1B locus 220.50 () Automated name-based View Maps
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 1B wPt-3451 locus 59.70 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-3451 locus 63.12 () Automated name-based View Maps
406326 locus 106.60 No other positions
306434 locus 108.50 No other positions
304157 locus 110.80 No other positions
wPt-0506 locus 114.00 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B wPt-0506 locus 63.40 () Automated name-based View Maps
Xgwm806 locus 130.70 No other positions
304889 locus 151.50 No other positions
Xcfa2147a locus 160.70 Wheat AB - Wheat AB, Carotenoid QTL, 2017 - Wheat_AB_2017_Carotenoid_QTL-1A cfa2147 locus 122.70 () Automated name-based View Maps
Wheat AB - Wheat AB, Carotenoid QTL, 2017 - Wheat_AB_2017_Carotenoid_QTL-1B cfa2147 locus 136.10 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1D cfa2147 locus 88.60 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A cfa2147 locus 77.80 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B cfa2147 locus 84.70 () Automated name-based View Maps
wPt-1770 locus 171.20 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B wPt-1770 locus 90.20 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_1 wPt-1770 locus 100.51 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-1770 locus 100.51 () Automated name-based View Maps
wPt-1973 locus 172.40 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B wPt-1973 locus 92.90 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.