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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Wheat AB-T. turgidum, Langdon x G18-16
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - T. turgidum, Langdon x G18-16 [ View Map Set Info ]
Map Name: Tt-LxG-5B
Map Start: 0
Map Stop: 209.8
Features by Type:
29 locus
29 Total

Map Features

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Items 1 to 25 of 29.       of 2 | Next
Wheat AB - T. turgidum, Langdon x G18-16 - Tt-LxG-5B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm234 locus 0 Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-5B Xgwm234 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-5B Xgwm234 locus 12.5 () Automated name-based View Maps
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 5B1 Xgwm234 locus 12.9 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5B Xgwm234 locus 21 () Automated name-based View Maps
Xgwm443 locus 9.5 Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-5A Xgwm443 locus 30.1 () Automated name-based View Maps
346957 locus 19.8 No other positions
Xgwm1180 locus 34.2 No other positions
wPt-1951 locus 38.7 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-5B wPt-1951 locus 69.07 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B wPt-1951 locus 29.1 () Automated name-based View Maps
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 5B1 wPt-1951 locus 49.5 () Automated name-based View Maps
XBarc128a locus 43 No other positions
Xgwm1108 locus 49.6 No other positions
Xgwm371 locus 54.8 Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-5B Xgwm371 locus 77 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5B Xgwm371 locus 50 () Automated name-based View Maps
Wheat ABD - Wheat, Finch x Eltan - Wheat, Finch x Eltan 5B.1 Xgwm371 locus 1.9 () Automated name-based View Maps
Xgwm831 locus 59.9 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5B Xgwm831 locus 54 () Automated name-based View Maps
Xgwm1191 locus 62 No other positions
Xgwm499 locus 66.5 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5B Xgwm499 locus 68 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-5B Xgwm499 locus 60.5 () Automated name-based View Maps
Wheat ABD - Wheat_Yr79_2018 - Wheat_Yr79_2018-5BS Xgwm499 locus 61.4 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Finch x Eltan - Wheat, Finch x Eltan 5B.1 Xgwm499 locus 8.6 () Automated name-based View Maps
Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-5B Xgwm499 locus 105.3 () Automated name-based View Maps
Xwmc415b locus 77 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5A Xwmc415b locus 61 () Automated name-based View Maps
348501 locus 87.7 No other positions
374741 locus 89.8 No other positions
wPt-3661 locus 95.6 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-3661 locus 85.43 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-5B wPt-3661 locus 122.24 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B wPt-3661 locus 51.5 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_5 wPt-3661 locus 85.43 () Automated name-based View Maps
Xgwm1043 locus 98.4 No other positions
Xgwm777 locus 104 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5B Xgwm777 locus 82 () Automated name-based View Maps
wPt-0498 locus 109.8 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B wPt-0498 locus 58.1 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-5B wPt-0498 locus 137.86 (cM) Automated name-based View Maps
wPt-1733 locus 121.3 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-5B wPt-1733 locus 156.38 (cM) Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-1733 locus 96.44 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_5 wPt-1733 locus 96.44 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B wPt-1733 locus 65.9 () Automated name-based View Maps
Xgwm408 locus 128.2 Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 5B1 Xgwm408 locus 121.8 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-5B Xgwm408 locus 103.2 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5B Xgwm408 locus 108 () Automated name-based View Maps
Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-5B Xgwm408 locus 160.9 () Automated name-based View Maps
wPt-5896 locus 133.2 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-5B wPt-5896 locus 149.63 (cM) Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_5 wPt-5896 locus 96.54 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B wPt-5896 locus 63.1 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-5896 locus 96.54 () Automated name-based View Maps
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 5B1 wPt-5896 locus 126.2 () Automated name-based View Maps
306463 locus 156.7 No other positions
wPt-6880 locus 163.9 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B wPt-6880 locus 77.9 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-5B wPt-6880 locus 184.81 (cM) Automated name-based View Maps
310864 locus 173.2 No other positions
Xgwm1016b locus 181.5 No other positions

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