*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat AB-T. turgidum, Messapia x dicoccoides, SSR
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Tturgidum-SSR-3A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - T. turgidum, Messapia x dicoccoides, SSR [ View Map Set Info ]
Map Name: Tturgidum-SSR-3A
Map Start: -58.4
Map Stop: 88.8
Features by Type:
17 locus
17 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 17 of 17.
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-3A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Centromere-3A locus 0 Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-3A Centromere-3A locus 46.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Centromere-3A locus 45.4 - 49.2 () Automated name-based View Maps
Wheat ABD - 3A, CNN x WI - 3A, CNN x WI Centromere-3A locus 79 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-3A Centromere-3A locus 52.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-3A Centromere-3A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-3A Centromere-3A locus 56 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-3A Centromere-3A locus 59.5 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Centromere-3A locus 17.3 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-3A Centromere-3A locus 55 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-3A Centromere-3A locus 63.5 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3A Centromere-3A locus 72 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3A Centromere-3A locus 50.3 - 56.9 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-3A Centromere-3A locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Centromere-3A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Centromere-3A locus 121 - 127.1 () Automated name-based View Maps
Xpsr598-3A locus -27.9 Wheat ABD - Wheat, Gale - Ta-Gale-3A Xpsr598-3A locus -11.4 () Automated name-based View Maps
Wheat ABD - 3A, SxY, QTL - 3A-SxY Xpsr598-3A locus 185 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Xpsr598-3A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3A Xpsr598-3A locus 64.3 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-3A Xpsr598-3A locus 51 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Xpsr598-3A locus -17.3 () Automated name-based View Maps
Xgwm666-3A locus -12 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3A Xgwm666-3A locus 174 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3A Xgwm666-3A locus 0.21 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-3A Xgwm666-3A locus 107.8 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-3A Xgwm666-3A locus 41.3 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3A Xgwm666-3A locus 45.4 () Automated name-based View Maps
Xpsr156-3A locus -5.6 Wheat ABD - 3A, SxY, QTL - 3A-SxY Xpsr156-3A locus 198 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Xpsr156-3A locus 22 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-3A Xpsr156-3A locus 4.9 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Xpsr156-3A locus 4.7 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-3A Xpsr156-3A locus 97.4 () Automated name-based View Maps
Xgwm369-3A locus -58.4 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3A Xgwm369-3A locus 13.8 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-3A Xgwm369-3A locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-3A Xgwm369-3A locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-3A Xgwm369-3A locus 30 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-3A Xgwm369-3A locus 30.5 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3A Xgwm369-3A locus 31.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xgwm369-3A locus 29.9 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3A Xgwm369-3A locus 21.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xgwm369-3A locus 39.9 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-3A Xgwm369-3A locus 23 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3A Xgwm369-3A locus 11 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3A Xgwm369-3A locus -0.72 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-3A Xgwm369-3A locus 8.8 () Automated name-based View Maps
Wheat ABD - Wheat_Yr76_2016 - Wheat_Yr76_2016-3A Xgwm369-3A locus 23.4 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Xgwm369-3A locus 10.05 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3A Xgwm369-3A locus 0 () Automated name-based View Maps
Xgwm162-3A locus 58.6 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Xgwm162-3A locus 138.6 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3A Xgwm162-3A locus 0.21 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3A Xgwm162-3A locus 66.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3A Xgwm162-3A locus 127.3 () Automated name-based View Maps
Xpsr549-3A locus 37.5 Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Xpsr549-3A locus 33.5 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Xpsr549-3A locus 54.9 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-3A Xpsr549-3A locus 27.3 () Automated name-based View Maps
Xpsr578-3A locus 11.1 Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Xpsr578-3A locus 37.6 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Xpsr578-3A locus 20.3 () Automated name-based View Maps
Wheat ABD - 3A, SxY, QTL - 3A-SxY Xpsr578-3A locus 210 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-3A Xpsr578-3A locus 67 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-3A Xpsr578-3A locus 8.1 () Automated name-based View Maps
Xpsr1203-3A locus 88.8 Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-3A Xpsr1203-3A locus 167 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Xpsr1203-3A locus 87.8 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-3A Xpsr1203-3A locus 93.9 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Xpsr1203-3A locus 95.2 () Automated name-based View Maps
Xutv3-3A locus -22.2 Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Xutv3-3A locus -11.6 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Xutv3-3A locus 5.7 () Automated name-based View Maps
Xmgb228-3A locus -15.3 Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Xmgb228-3A locus -4.7 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Xmgb228-3A locus 12.6 () Automated name-based View Maps
Xmgb77-3A locus -14.5 Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Xmgb77-3A locus 13.5 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Xmgb77-3A locus -3.8 () Automated name-based View Maps
Xmgb58-3A locus -9.3 Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Xmgb58-3A locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Xmgb58-3A locus 17.3 () Automated name-based View Maps
Xutv1055-3A locus 41.4 Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Xutv1055-3A locus 59.2 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Xutv1055-3A locus 37.8 () Automated name-based View Maps
Xutv560-3A locus 79.8 Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Xutv560-3A locus 97.2 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Xutv560-3A locus 104.6 () Automated name-based View Maps
Xgwm674-3A locus -3.2 Wheat AB - T.dicoccoides, FHB QTL - Tdicoccoides-FHB-QTL-3AS Xgwm674-3A locus 41.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Xgwm674-3A locus 47.8 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-3A Xgwm674-3A locus 132.5 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3A Xgwm674-3A locus 0.21 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3A Xgwm674-3A locus 45.6 () Automated name-based View Maps
Xgwm638-3A locus 19.2 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.