*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat AB-T. turgidum, Messapia x dicoccoides, SSR
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Tturgidum-SSR-3A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - T. turgidum, Messapia x dicoccoides, SSR [ View Map Set Info ]
Map Name: Tturgidum-SSR-3A
Map Start: -58.40
Map Stop: 88.80
Features by Type:
17 locus
17 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 17 of 17.
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-3A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Centromere-3A locus 0.00 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-3A Centromere-3A locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-3A Centromere-3A locus 46.30 () Automated name-based View Maps
Wheat ABD - 3A, CNN x WI - 3A, CNN x WI Centromere-3A locus 79.00 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Centromere-3A locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Centromere-3A locus 45.40 - 49.20 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3A Centromere-3A locus 50.30 - 56.90 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Centromere-3A locus 17.30 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3A Centromere-3A locus 72.00 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-3A Centromere-3A locus 55.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-3A Centromere-3A locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-3A Centromere-3A locus 59.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Centromere-3A locus 121.00 - 127.10 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-3A Centromere-3A locus 63.50 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-3A Centromere-3A locus 56.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-3A Centromere-3A locus 52.40 () Automated name-based View Maps
Xpsr598-3A locus -27.90 Wheat ABD - 3A, SxY, QTL - 3A-SxY Xpsr598-3A locus 185.00 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Xpsr598-3A locus -17.30 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Xpsr598-3A locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3A Xpsr598-3A locus 64.30 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-3A Xpsr598-3A locus -11.40 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-3A Xpsr598-3A locus 51.00 () Automated name-based View Maps
Xgwm666-3A locus -12.00 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3A Xgwm666-3A locus 174.00 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-3A Xgwm666-3A locus 107.80 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-3A Xgwm666-3A locus 41.30 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3A Xgwm666-3A locus 45.40 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3A Xgwm666-3A locus 0.21 () Automated name-based View Maps
Xpsr156-3A locus -5.60 Wheat ABD - 3A, SxY, QTL - 3A-SxY Xpsr156-3A locus 198.00 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Xpsr156-3A locus 4.70 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-3A Xpsr156-3A locus 97.40 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Xpsr156-3A locus 22.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-3A Xpsr156-3A locus 4.90 () Automated name-based View Maps
Xgwm369-3A locus -58.40 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Xgwm369-3A locus 10.05 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-3A Xgwm369-3A locus 31.30 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3A Xgwm369-3A locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3A Xgwm369-3A locus 13.80 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3A Xgwm369-3A locus 21.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xgwm369-3A locus 39.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3A Xgwm369-3A locus 11.00 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-3A Xgwm369-3A locus 30.00 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-3A Xgwm369-3A locus 30.50 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-3A Xgwm369-3A locus 23.00 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-3A Xgwm369-3A locus 0.00 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-3A Xgwm369-3A locus 8.80 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xgwm369-3A locus 29.90 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3A Xgwm369-3A locus -0.72 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-3A Xgwm369-3A locus 0.00 () Automated name-based View Maps
Xgwm162-3A locus 58.60 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3A Xgwm162-3A locus 127.30 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3A Xgwm162-3A locus 66.80 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Xgwm162-3A locus 138.60 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3A Xgwm162-3A locus 0.21 () Automated name-based View Maps
Xpsr549-3A locus 37.50 Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Xpsr549-3A locus 33.50 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-3A Xpsr549-3A locus 27.30 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Xpsr549-3A locus 54.90 () Automated name-based View Maps
Xpsr578-3A locus 11.10 Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-3A Xpsr578-3A locus 67.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-3A Xpsr578-3A locus 8.10 () Automated name-based View Maps
Wheat ABD - 3A, SxY, QTL - 3A-SxY Xpsr578-3A locus 210.00 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Xpsr578-3A locus 20.30 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Xpsr578-3A locus 37.60 () Automated name-based View Maps
Xpsr1203-3A locus 88.80 Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Xpsr1203-3A locus 95.20 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-3A Xpsr1203-3A locus 167.00 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Xpsr1203-3A locus 87.80 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-3A Xpsr1203-3A locus 93.90 () Automated name-based View Maps
Xutv3-3A locus -22.20 Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Xutv3-3A locus -11.60 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Xutv3-3A locus 5.70 () Automated name-based View Maps
Xmgb228-3A locus -15.30 Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Xmgb228-3A locus -4.70 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Xmgb228-3A locus 12.60 () Automated name-based View Maps
Xmgb77-3A locus -14.50 Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Xmgb77-3A locus -3.80 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Xmgb77-3A locus 13.50 () Automated name-based View Maps
Xmgb58-3A locus -9.30 Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Xmgb58-3A locus 17.30 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Xmgb58-3A locus 0.00 () Automated name-based View Maps
Xutv1055-3A locus 41.40 Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Xutv1055-3A locus 37.80 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Xutv1055-3A locus 59.20 () Automated name-based View Maps
Xutv560-3A locus 79.80 Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-3A Xutv560-3A locus 97.20 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3A Xutv560-3A locus 104.60 () Automated name-based View Maps
Xgwm674-3A locus -3.20 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Xgwm674-3A locus 47.80 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-3A Xgwm674-3A locus 132.50 () Automated name-based View Maps
Wheat AB - T.dicoccoides, FHB QTL - Tdicoccoides-FHB-QTL-3AS Xgwm674-3A locus 41.20 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3A Xgwm674-3A locus 0.21 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3A Xgwm674-3A locus 45.60 () Automated name-based View Maps
Xgwm638-3A locus 19.20 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.