*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat AB-T. turgidum, Messapia x dicoccoides, SSR
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Tturgidum-SSR-4A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - T. turgidum, Messapia x dicoccoides, SSR [ View Map Set Info ]
Map Name: Tturgidum-SSR-4A
Map Start: -5.7
Map Stop: 133.6
Features by Type:
24 locus
24 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 24 of 24.
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-4A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xpsr573-4A locus 127.9 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xpsr573-4A locus 37.6 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-4A Xpsr573-4A locus 151.1 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-4A Xpsr573-4A locus 101.5 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4A Xpsr573-4A locus 107.2 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-4A Xpsr573-4A locus 143.5 () Automated name-based View Maps
Xgwm160-4A locus 123.8 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xgwm160-4A locus 77.1 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xgwm160-4A locus 78.9 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xgwm160-4A locus 45.2 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xgwm160-4A locus 0.9 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4A Xgwm160-4A locus 105.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4A Xgwm160-4A locus 102.05 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xgwm160-4A locus 115.5 () Automated name-based View Maps
Xgwm397-4A locus 21.1 Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-4A Xgwm397-4A locus 21.9 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xgwm397-4A locus 134.8 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4A Xgwm397-4A locus 10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xgwm397-4A locus 41.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4A Xgwm397-4A locus 45.5 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4A Xgwm397-4A locus 31.6 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xgwm397-4A locus 18.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xgwm397-4A locus 39.6 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xgwm397-4A locus 0.62 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-4A Xgwm397-4A locus 7 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-4A Xgwm397-4A locus 3.3 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-4A Xgwm397-4A locus -48.8 () Automated name-based View Maps
Centromere-4A locus 0 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4A Centromere-4A locus 15.2 - 19 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-4A Centromere-4A locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-4A Centromere-4A locus 9.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4A Centromere-4A locus 27.3 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-4A Centromere-4A locus 39.4 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4A Centromere-4A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4A Centromere-4A locus 42.7 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-4A Centromere-4A locus 14.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4A Centromere-4A locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-4A Centromere-4A locus 210.8 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-4A Centromere-4A locus 38 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-4A Centromere-4A locus 0 () Automated name-based View Maps
Xpsr160-4A locus 133.6 Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-4A Xpsr160-4A locus 156.6 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4A Xpsr160-4A locus 112.8 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-4A Xpsr160-4A locus 100.1 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-4A Xpsr160-4A locus 149.3 () Automated name-based View Maps
Xgwm610-4A locus 12.9 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4A Xgwm610-4A locus 27.85 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-4A Xgwm610-4A locus -42.7 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-4A Xgwm610-4A locus 61 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xgwm610-4A locus 12.1 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xgwm610-4A locus -0.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xgwm610-4A locus 30.4 () Automated name-based View Maps
Xgwm637-4A locus 48 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-4A Xgwm637-4A locus 225.2 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-4A Xgwm637-4A locus 381.9 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xgwm637-4A locus 36.5 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xgwm637-4A locus 0.62 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xgwm637-4A locus 63.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4A Xgwm637-4A locus 57.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xgwm637-4A locus 45 () Automated name-based View Maps
Xpsr580-4A locus 62.8 Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-4A Xpsr580-4A locus 61.6 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-4A Xpsr580-4A locus 77.8 () Automated name-based View Maps
Xpsr604-4A locus 89 Wheat ABD - Wheat, Gale - Ta-Gale-4A Xpsr604-4A locus 85.7 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-4A Xpsr604-4A locus 94.5 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-4A Xpsr604-4A locus 113.3 () Automated name-based View Maps
Xpsr1051-4A locus 87.4 Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-4A Xpsr1051-4A locus 111.6 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-4A Xpsr1051-4A locus 92.8 () Automated name-based View Maps
Xpsr1316-4A locus 33.8 Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-4A Xpsr1316-4A locus 36.1 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-4A Xpsr1316-4A locus 26.9 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-4A Xpsr1316-4A locus 52.2 () Automated name-based View Maps
Xpsr1327-4A locus 28.7 Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-4A Xpsr1327-4A locus 31.1 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-4A Xpsr1327-4A locus 46.9 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-4A Xpsr1327-4A locus 21.9 () Automated name-based View Maps
Xgwm265-4A locus 42.9 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4A Xgwm265-4A locus 25.4 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-4A Xgwm265-4A locus 63.9 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-4A Xgwm265-4A locus 49.8 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-4A Xgwm265-4A locus 92.4 () Automated name-based View Maps
Xmgb299-4A locus -5.7 Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-4A Xmgb299-4A locus 7.4 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-4A Xmgb299-4A locus -1.8 () Automated name-based View Maps
Xpsr39-4A locus -4.8 Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-4A Xpsr39-4A locus -0.9 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-4A Xpsr39-4A locus 8.3 () Automated name-based View Maps
Xmgb7-4A locus 8.8 Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-4A Xmgb7-4A locus 5.1 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-4A Xmgb7-4A locus 14.3 () Automated name-based View Maps
Xwg876-4A locus 11.2 Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-4A Xwg876-4A locus 17.3 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-4A Xwg876-4A locus 8.1 () Automated name-based View Maps
Xmgb12-4A locus 36.7 Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-4A Xmgb12-4A locus 29.8 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-4A Xmgb12-4A locus 39 () Automated name-based View Maps
Xutv1371-4A locus 90.8 Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-4A Xutv1371-4A locus 96.4 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-4A Xutv1371-4A locus 115.2 () Automated name-based View Maps
Xutv1071-4A locus 98.7 Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-4A Xutv1071-4A locus 115.6 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-4A Xutv1071-4A locus 123.4 () Automated name-based View Maps
Xutv1025-4A locus 112.2 Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-4A Xutv1025-4A locus 138.2 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-4A Xutv1025-4A locus 130 () Automated name-based View Maps
Xmgb9-4A locus 131.7 Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-4A Xmgb9-4A locus 147.2 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-4A Xmgb9-4A locus 154.7 () Automated name-based View Maps
Xgwm601-4A locus 3.2 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4A Xgwm601-4A locus 12 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xgwm601-4A locus 0.22 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xgwm601-4A locus 23 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xgwm601-4A locus 8.9 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-4A Xgwm601-4A locus 32.4 () Automated name-based View Maps
Xgwm118-4A locus 49.7 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.