*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat AB-T. turgidum, Messapia x dicoccoides, SSR
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Tturgidum-SSR-5B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - T. turgidum, Messapia x dicoccoides, SSR [ View Map Set Info ]
Map Name: Tturgidum-SSR-5B
Map Start: 13.3
Map Stop: 182.2
Features by Type:
17 locus
17 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 17 of 17.
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm499-5B locus 32.9 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm499-5B locus 45.6 () Automated name-based View Maps
Wheat ABD - Wheat_Yr79_2018 - Wheat_Yr79_2018-5BS Xgwm499-5B locus 61.4 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5B Xgwm499-5B locus 43.3 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-5B Xgwm499-5B locus 66.5 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5B Xgwm499-5B locus 75.1 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5B Xgwm499-5B locus 75.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xgwm499-5B locus 65.7 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm499-5B locus 0.65 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-5B Xgwm499-5B locus 109.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm499-5B locus 47 () Automated name-based View Maps
Xgwm408-5B locus 87.5 Wheat ABD - 5BL, CS, 0.75-0.79 interval - 5BL, CS, 0.75-0.79 interval Xgwm408-5B locus 14.4 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5B Xgwm408-5B locus 133.7 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-5B Xgwm408-5B locus 0 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-5B Xgwm408-5B locus 100.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm408-5B locus 95.2 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5B Xgwm408-5B locus 117.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm408-5B locus 89.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xgwm408-5B locus 111 () Automated name-based View Maps
Xgwm604-5B locus 95.5 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5B Xgwm604-5B locus 123.7 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5B Xgwm604-5B locus 107.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xgwm604-5B locus 116.2 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm604-5B locus 0.9 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-5B Xgwm604-5B locus 179.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm604-5B locus 101.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm604-5B locus 94.9 () Automated name-based View Maps
Xcdo412-5B locus 16.2 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5B Xcdo412-5B locus 7.1 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5B Xcdo412-5B locus 4.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5B Xcdo412-5B locus 36.8 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-5B Xcdo412-5B locus 16.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xcdo412-5B locus 31.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xcdo412-5B locus 36.8 () Automated name-based View Maps
Xpsr115-5B locus 136.6 Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5B Xpsr115-5B locus 135.8 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-5B Xpsr115-5B locus 134.7 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-5B Xpsr115-5B locus 100.1 () Automated name-based View Maps
Xpsr145-5B locus 99.7 Wheat ABD - 5BL, CS, 0.75-0.79 interval - 5BL, CS, 0.75-0.79 interval Xpsr145-5B locus 23.4 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5B Xpsr145-5B locus 98.5 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5B Xpsr145-5B locus 120.2 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-5B Xpsr145-5B locus 98.1 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, Group 5 - Ta-Physical-Sarma-5B Xpsr145-5B locus 0.81 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-5B Xpsr145-5B locus 78.9 () Automated name-based View Maps
Xpsr167-5B locus 20 Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5B Xpsr167-5B locus 2 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-5B Xpsr167-5B locus 17.2 () Automated name-based View Maps
Xgwm213-5B locus 13.3 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm213-5B locus 32.5 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm213-5B locus 0.42 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5B Xgwm213-5B locus 42.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm213-5B locus 34.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xgwm213-5B locus 37.2 () Automated name-based View Maps
Wheat ABD - Wheat_Yr79_2018 - Wheat_Yr79_2018-5BS Xgwm213-5B locus 43.4 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5B Xgwm213-5B locus 67.9 () Automated name-based View Maps
Xgwm554-5B locus 47.6 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xgwm554-5B locus 81.55 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5B Xgwm554-5B locus 88.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm554-5B locus 63.1 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm554-5B locus 0.78 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-5B Xgwm554-5B locus 143 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm554-5B locus 64 () Automated name-based View Maps
Xpsr1206-5B locus 155.4 Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5B Xpsr1206-5B locus 152.2 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-5B Xpsr1206-5B locus 150.6 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-5B Xpsr1206-5B locus 115.2 () Automated name-based View Maps
Xpsr1316-5B locus 182.2 Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-5B Xpsr1316-5B locus 177.5 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5B Xpsr1316-5B locus 191.5 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-5B Xpsr1316-5B locus 119.2 () Automated name-based View Maps
Xpsr637-5B locus 47.6 Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-5B Xpsr637-5B locus 39 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-5B Xpsr637-5B locus 39.9 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-5B Xpsr637-5B locus 40.5 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5B Xpsr637-5B locus 39.5 () Automated name-based View Maps
Xgwm118-5B locus 151.6 Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-5B Xgwm118-5B locus 180.5 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm118-5B locus 0.14 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-5B Xgwm118-5B locus 63 () Automated name-based View Maps
Xpsr120-5B locus 56.7 Wheat ABD - 5BL, CS, 0.75-0.79 interval - 5BL, CS, 0.75-0.79 interval Xpsr120-5B locus 0.5 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5B Xpsr120-5B locus 64.1 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5B Xpsr120-5B locus 53.1 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-5B Xpsr120-5B locus 48.1 () Automated name-based View Maps
Xutv1015-5B locus 107.1 Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5B Xutv1015-5B locus 106 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-5B Xutv1015-5B locus 104.9 () Automated name-based View Maps
Xutv1378-5B locus 123 Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-5B Xutv1378-5B locus 121 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5B Xutv1378-5B locus 122.1 () Automated name-based View Maps
Xgwm639-5B locus 39.7 Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-5B Xgwm639-5B locus 136.1 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5B Xgwm639-5B locus 77.1 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5B Xgwm639-5B locus 0.65 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-5B Xgwm639-5B locus 135.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xgwm639-5B locus 73.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm639-5B locus 53.2 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5B Xgwm639-5B locus 62 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.