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Map Set Wheat AB-T. turgidum, Omrabi5 x dicoccoides, QTL
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL [ View Map Set Info ]
Map Name: Tt-Oxd-QTL-2A
Map Start: 0
Map Stop: 303.8
Features by Type:
30 locus
30 Total

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Items 1 to 25 of 30.       of 2 | Next
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-2A
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Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm558-2A locus 232.7 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2A Xgwm558-2A locus 0.42 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xgwm558-2A locus 80.5 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2A Xgwm558-2A locus 54 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xgwm558-2A locus 114.6 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-2A Xgwm558-2A locus 100.7 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-2A Xgwm558-2A locus 107.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xgwm558-2A locus 98.9 () Automated name-based View Maps
(Break2) locus 117.6 Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D (Break2) locus 140 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-6B (Break2) locus 136 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-7A (Break2) locus 43.1 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1B (Break2) locus 199 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-2D (Break2) locus 23.9 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-2A (Break2) locus 32.1 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-5A (Break2) locus 119.4 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-4B (Break2) locus 255.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-7B (Break2) locus 160.8 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-5D (Break2) locus 42.8 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-6D (Break2) locus 56.3 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-3B (Break2) locus 157.6 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-2B (Break2) locus 185 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5B (Break2) locus 248 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3B (Break2) locus 115.9 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-7A (Break2) locus 53 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-2A (Break2) locus 139.2 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-5A (Break2) locus 123 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-5D (Break2) locus 68 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-4B (Break2) locus 42 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4D (Break2) locus 196 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-7D (Break2) locus 128 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-4A (Break2) locus 168 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-6A (Break2) locus 155 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3D (Break2) locus 170 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-7A (Break2) locus -46.7 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3B (Break2) locus 173 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-7A (Break2) locus 278.9 () Automated name-based View Maps
Barley - Barley, Lx41 - Hordeum-Lx41-2H (Break2) locus 178 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3D (Break2) locus 143 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-1A (Break2) locus 159.8 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-5H (Break2) locus 109.6 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-2A (Break2) locus 201 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-6B (Break2) locus 86 () Automated name-based View Maps
(Break3) locus 167.6 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-2A (Break3) locus 289 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-6B (Break3) locus 196 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3D (Break3) locus 229 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-7A (Break3) locus 113.4 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-7A (Break3) locus 44.7 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-2B (Break3) locus 201 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-7A (Break3) locus 57 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-5A (Break3) locus 143 () Automated name-based View Maps
Centromere-2A locus 242.4 Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-2A Centromere-2A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2A Centromere-2A locus 105 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-2A Centromere-2A locus 82.2 () Automated name-based View Maps
Wheat AB - Durum Wheat, Anthocyanin, 2010 - Tdurum_TRI15744xTRI2719-2A Centromere-2A locus 20.6 (cM) Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-2A Centromere-2A locus 83.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Centromere-2A locus 97 - 100.8 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-2A Centromere-2A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-2A Centromere-2A locus 96 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-2A Centromere-2A locus 85 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-2A Centromere-2A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, 2006, purple grain - Wheat_Novo67xPurple_2006-2A Centromere-2A locus 10 (cM) Automated name-based View Maps
Wheat ABD - Wheat, 2006, purple grain - Wheat_Novo67xPurpleFeed_2006-2A Centromere-2A locus 27.9 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-2A Centromere-2A locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-2A Centromere-2A locus 0 () Automated name-based View Maps
Xgwm382-2A locus 291.5 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xgwm382-2A locus 113.9 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-2A Xgwm382-2A locus 143.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xgwm382-2A locus 155.8 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2A Xgwm382-2A locus 200.7 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2A Xgwm382-2A locus 140.2 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2A Xgwm382-2A locus 0.92 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-2A Xgwm382-2A locus 247 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xgwm382-2A locus 133.2 () Automated name-based View Maps
Xgwm614-2A locus 87 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xgwm614-2A locus 4 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2A Xgwm614-2A locus 0.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xgwm614-2A locus 53.2 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2A Xgwm614-2A locus 10.4 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2A Xgwm614-2A locus -0.89 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xgwm614-2A locus 41.3 () Automated name-based View Maps
Xgwm512-2A locus 142.6 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xgwm512-2A locus 42.7 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2A Xgwm512-2A locus -0.39 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xgwm512-2A locus 65.1 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-2A Xgwm512-2A locus 30.5 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2A Xgwm512-2A locus 16 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xgwm512-2A locus 23 () Automated name-based View Maps
Xgwm448-2A locus 209 Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-2A Xgwm448-2A locus 104.2 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2A Xgwm448-2A locus 52 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xgwm448-2A locus 95.9 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-2A Xgwm448-2A locus -11.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xgwm448-2A locus 108.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xgwm448-2A locus 78 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2A Xgwm448-2A locus -0.89 () Automated name-based View Maps
Xgwm95-2A locus 229.9 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xgwm95-2A locus 77.7 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-2A Xgwm95-2A locus 127.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xgwm95-2A locus 110.4 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2A Xgwm95-2A locus -0.39 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-2A Xgwm95-2A locus 89.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xgwm95-2A locus 95.7 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2A Xgwm95-2A locus 52.5 () Automated name-based View Maps
Xgwm71-2A locus 17.7 Wheat A - T. boeoticum x monococcum - T.b.xT.m.-2A Xgwm71-2A locus 94.7 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2A Xgwm71-2A locus 55.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xgwm71-2A locus 75.6 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-2A Xgwm71-2A locus 79 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-2A Xgwm71-2A locus 97 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-2A Xgwm71-2A locus -3.3 () Automated name-based View Maps
Xgwm311-2A locus 289.4 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2A Xgwm311-2A locus 0.92 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xgwm311-2A locus 133 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-2A Xgwm311-2A locus 247.6 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2A Xgwm311-2A locus 200.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xgwm311-2A locus 112.9 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2A Xgwm311-2A locus 142.5 () Automated name-based View Maps
(Break1) locus 62 Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-3B (Break1) locus 40.4 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-5A (Break1) locus 69.4 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3B (Break1) locus 25 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3D (Break1) locus 25 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-4B (Break1) locus 25 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-1A (Break1) locus 56.4 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D (Break1) locus 28 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-7B (Break1) locus 107.2 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-7A (Break1) locus 217.1 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-5H (Break1) locus 36.4 () Automated name-based View Maps
XMcttEaag146-2A locus 0 No other positions
XMcatEact163-2A locus 37 No other positions
XMctcEact285-2A locus 92.6 No other positions
Xgwm249-2A.1 locus 192.6 No other positions
XMctgEagc236-2A locus 218.9 No other positions
XMctgEacg108-2A locus 226.7 No other positions
Xgwm249-2A.2 locus 228.1 No other positions
XMctgEagc213-2A locus 233.2 No other positions
XMcttEaag248-2A locus 234.4 No other positions
XMcacEaag255-2A locus 239 No other positions
XMcacEaag356-2A locus 245.8 No other positions
XMcaaEagg227-2A locus 249 No other positions
XMctaEacg385-2A locus 255.3 No other positions

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