*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat AB-T. turgidum, Omrabi5 x dicoccoides, QTL
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Tt-Oxd-QTL-4B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL [ View Map Set Info ]
Map Name: Tt-Oxd-QTL-4B
Map Start: 0
Map Stop: 280.2
Features by Type:
18 locus
1 qtl
19 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 19 of 19.
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-4B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm368-4B locus 0 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4B Xgwm368-4B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4B Xgwm368-4B locus 33.4 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4B Xgwm368-4B locus 22.3 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4B Xgwm368-4B locus 88.9 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4B Xgwm368-4B locus -0.18 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4B Xgwm368-4B locus 22 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4B Xgwm368-4B locus 12.4 () Automated name-based View Maps
(Break2) locus 255.2 Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-7A (Break2) locus -46.7 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-4B (Break2) locus 42 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-1A (Break2) locus 159.8 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-7A (Break2) locus 53 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-6B (Break2) locus 136 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-3B (Break2) locus 157.6 () Automated name-based View Maps
Barley - Barley, Lx41 - Hordeum-Lx41-2H (Break2) locus 178 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-5H (Break2) locus 109.6 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3D (Break2) locus 170 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-7D (Break2) locus 128 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-6A (Break2) locus 155 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-5A (Break2) locus 123 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-4A (Break2) locus 168 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-7A (Break2) locus 43.1 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-6D (Break2) locus 56.3 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-7A (Break2) locus 278.9 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-5A (Break2) locus 119.4 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-2A (Break2) locus 117.6 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3D (Break2) locus 143 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-5D (Break2) locus 68 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3B (Break2) locus 173 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4D (Break2) locus 196 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5B (Break2) locus 248 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-2A (Break2) locus 32.1 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1B (Break2) locus 199 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-2A (Break2) locus 139.2 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-2A (Break2) locus 201 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-2D (Break2) locus 23.9 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-5D (Break2) locus 42.8 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-6B (Break2) locus 86 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D (Break2) locus 140 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-3B (Break2) locus 115.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-7B (Break2) locus 160.8 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-2B (Break2) locus 185 () Automated name-based View Maps
Centromere-4B locus 75 Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-4B Centromere-4B locus 11 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-4B Centromere-4B locus 75.4 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-4B Centromere-4B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-4B Centromere-4B locus 83 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4B Centromere-4B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4B Centromere-4B locus 5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4B Centromere-4B locus 19.9 - 23.7 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-4B Centromere-4B locus 47.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4B Centromere-4B locus 19 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-4B Centromere-4B locus 146.9 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-4B Centromere-4B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4B Centromere-4B locus 29 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-4B Centromere-4B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-4B Centromere-4B locus 60.2 () Automated name-based View Maps
Xgwm107-4B locus 220.6 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4B Xgwm107-4B locus 23.1 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4B Xgwm107-4B locus 24.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4B Xgwm107-4B locus 26.2 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4B Xgwm107-4B locus -0.18 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-4B Xgwm107-4B locus 11 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4B Xgwm107-4B locus 17.8 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-4B Xgwm107-4B locus 34.4 () Automated name-based View Maps
Xgwm165-4B locus 145.8 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4B Xgwm165-4B locus 37.8 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4B Xgwm165-4B locus 27.6 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-4B Xgwm165-4B locus 15 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4B Xgwm165-4B locus 10 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-4B Xgwm165-4B locus 6 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-4B Xgwm165-4B locus 36.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4B Xgwm165-4B locus 33.15 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4B Xgwm165-4B locus 27.1 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-4B Xgwm165-4B locus 56 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-4B Xgwm165-4B locus 423.2 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-4B Xgwm165-4B locus 60.2 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4B Xgwm165-4B locus 0.93 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-4B Xgwm165-4B locus 41 () Automated name-based View Maps
Xgwm113-4B locus 50 Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-4B Xgwm113-4B locus 37 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-4B Xgwm113-4B locus 6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4B Xgwm113-4B locus 20 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4B Xgwm113-4B locus 24.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4B Xgwm113-4B locus 23.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4B Xgwm113-4B locus 32 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4B Xgwm113-4B locus -0.18 () Automated name-based View Maps
Xgwm251-4B locus 153.3 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4B Xgwm251-4B locus 0.93 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4B Xgwm251-4B locus 46.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4B Xgwm251-4B locus 35 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-4B Xgwm251-4B locus 12.1 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-4B Xgwm251-4B locus 48.1 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-4B Xgwm251-4B locus 50.8 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4B Xgwm251-4B locus 14.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4B Xgwm251-4B locus 50.05 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4B Xgwm251-4B locus 35.7 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-4B Xgwm251-4B locus 33 () Automated name-based View Maps
Xgwm375-4B locus 159.4 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4B Xgwm375-4B locus 51.4 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4B Xgwm375-4B locus 0.93 () Automated name-based View Maps
Xgwm538-4B locus 280.2 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4B Xgwm538-4B locus 49.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4B Xgwm538-4B locus 44.9 () Automated name-based View Maps
Wheat ABD - Wheat, WxH, KBunt QTL - Triticum-WxH-KBunt-QTL-4BL Xgwm538-4B locus 58 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-4B Xgwm538-4B locus 17.5 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4B Xgwm538-4B locus 31.2 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-4B Xgwm538-4B locus 37.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4B Xgwm538-4B locus 54.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4B Xgwm538-4B locus 61.15 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4B Xgwm538-4B locus 0.93 () Automated name-based View Maps
(Break1) locus 25 Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3D (Break1) locus 25 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-5A (Break1) locus 69.4 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-5H (Break1) locus 36.4 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3B (Break1) locus 25 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-7B (Break1) locus 107.2 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D (Break1) locus 28 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-1A (Break1) locus 56.4 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-7A (Break1) locus 217.1 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-3B (Break1) locus 40.4 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-2A (Break1) locus 62 () Automated name-based View Maps
XMctgEaag198-4B locus 100.7 No other positions
Xgwm149-4B.2 locus 119.2 No other positions
XMctcEagg89-4B locus 127.9 No other positions
Xgwm149-4B.1 locus 132.9 No other positions
XMcttEagg213-4B locus 136.5 No other positions
XMctgEaag137-4B locus 170.9 No other positions
XMctaEacg390-4B locus 182.9 No other positions
XMctaEacg200-4B locus 230.2 No other positions
Qtgw.ica-4BL qtl 134 - 139 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.