*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat AB-T. turgidum, Omrabi5 x dicoccoides, QTL
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Tt-Oxd-QTL-5A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL [ View Map Set Info ]
Map Name: Tt-Oxd-QTL-5A
Map Start: 0
Map Stop: 89.4
Features by Type:
10 locus
10 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 10 of 10.
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-5A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm186-5A locus 76.5 Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Xgwm186-5A locus 29.3 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5A Xgwm186-5A locus 44.05 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-5A Xgwm186-5A locus 129.7 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_5A Xgwm186-5A locus 0.18 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-5A Xgwm186-5A locus 88 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm186-5A locus 64.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgwm186-5A locus 75.8 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-5A Xgwm186-5A locus 43.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5A Xgwm186-5A locus 42.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Xgwm186-5A locus 64.1 () Automated name-based View Maps
Centromere-5A locus 47.8 Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-5A Centromere-5A locus 91 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-5A Centromere-5A locus 13.1 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5A Centromere-5A locus 20 () Automated name-based View Maps
Wheat ABD - 5A, DS 5AIran - 5A, DS 5AIran Centromere-5A locus 35.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5A Centromere-5A locus 25.3 - 29.1 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5A Centromere-5A locus 120.4 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5A Centromere-5A locus 33.1 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-5A Centromere-5A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5A Centromere-5A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-5A Centromere-5A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-5A Centromere-5A locus 46 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-5A Centromere-5A locus 36.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-5A Centromere-5A locus 60.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-5A Centromere-5A locus 15 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5A Centromere-5A locus 0 () Automated name-based View Maps
Xgwm443-5A locus 26.7 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgwm443-5A locus -13.9 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5A Xgwm443-5A locus 23.7 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-5A Xgwm443-5A locus 49 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-5A Xgwm443-5A locus 18.6 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5A Xgwm443-5A locus 0 () Automated name-based View Maps
XMcagEagg315-5A locus 0 No other positions
XMctgEacg298-5A locus 11.4 No other positions
Xgwm234-5A locus 20.8 No other positions
Xgwm205-5A.1 locus 30.2 No other positions
Xgwm205-5A.2 locus 32.3 No other positions
XMctgEagc156-5A locus 63.4 No other positions
XMctcEagg366-5A locus 89.4 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.